Pseudomonas putida GB-1: PputGB1_1173
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Entry
PputGB1_1173 CDS
T00650
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppg03016
]
PputGB1_1173
Enzymes [BR:
ppg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PputGB1_1173
Transfer RNA biogenesis [BR:
ppg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PputGB1_1173
Prokaryotic type
PputGB1_1173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ABY97081
UniProt:
B0KSC6
LinkDB
All DBs
Position
1331024..1332082
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AA seq
352 aa
AA seq
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MTELELLGPRASGEPLGTAVLKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPVRSISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDASLRVLKQVRHLR
KLQRGAHSANGFTLRLTALAADHQALDTRLEQLKQNGVPNYFGTQRFGHGGGNVHDALEW
AARKALPEQRNVRSRLLSAGRSFLFNQLLAARVADGSWARAQVGDLLAFTDSRSFFPAGE
AECADPRLAILDLHPTGPMWGEGASPAGAATAQLENAVGARQPALCQWLAQAGMDHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVREVVDLVSAGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggaactgctgggcccgcgcgcatcgggcgaaccgttgggcaccgccgta
ctcaaggcggtggccgaggatttccaggtcgacgaagtgctggatatccccctgtcgggg
cagggcgagcacctgtggctgtgggtcgagaagcgtgacctgaacactgaagaggccgcc
cgccgcctggcccgtgccgcaggcgtgcccgtgcgcagcatcagctatgccggcctgaag
gaccgccaggcgctgacccgccagtggttcagcctgcacctgccgggcaaggccgacccg
gacctgtcgcgggccgaggatgccagcctgcgtgtgctcaagcaggtgcgccacctgcgc
aagctccagcgcggcgcgcattcggccaacggttttaccctgcgcctgacggctctggca
gccgatcaccaggcgctggacacgcgcctggaacagctgaagcagaacggtgtgcccaac
tattttggcacccagcgcttcggccacggcggtggtaacgtgcatgacgccctcgagtgg
gctgcccgcaaggctttgcctgagcagcgcaacgtgcgttcgcggctgctttcggctggg
cgcagcttcctgttcaatcaactgctggctgcgcgtgtcgctgacggcagctgggctcgc
gcccaggtcggcgacctgctggcgttcactgacagccgtagtttcttcccggccggtgag
gcggaatgtgccgacccgcgcctggcgattctcgatctgcacccgactggccctatgtgg
ggcgagggcgcctcgcctgctggcgcagccactgcccagctggaaaacgccgttggcgca
cggcagccggcactttgccagtggttggcccaggcgggcatggatcacgaacggcgaatt
ctgcggctccctattggcggcctgacgtggcattatcccgagcctgatatcctgcaactg
gaattcgtcctgccggccggatgcttcgccaccgtggtggtgcgtgaagtcgtggatctg
gtgtcggcagggcagacggacagcccatgcgtattctga
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