Pseudomonas putida GB-1: PputGB1_1456
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Entry
PputGB1_1456 CDS
T00650
Name
(GenBank) YD repeat protein
Organism
ppg
Pseudomonas putida GB-1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
MFS_1
Motif
Other DBs
NCBI-ProteinID:
ABY97363
UniProt:
B0KUQ8
LinkDB
All DBs
Position
complement(1627462..1632531)
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AA seq
1689 aa
AA seq
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MSSMAAHSNANNFAVEKRVDPRTGQYGLSIAIPELVADSGAGASFSLNLAYNSMAAGDVG
YGEGWDLNLSRFVEHAYPEGGGALSLFTGEQFTVDGIESISEKKLDTFHFHKDGEGRFRV
VHRSGVVEILEEMGAGAQRAALPTRIYAPSGHWLELTYASNSVTPGWFCLTHVHSGHPDG
AGKGRLLLQVAYGGTTEFTLYPGAADVQASQVLKFKGRQLQNVVLPDQTQWQFDYQTVHG
QTCVTKVVSPTGAVEHIEYGIDGDPGHALPGVDKKLPRVKRHRVQPGQGQPEMRTDYDYS
TENFMGNGSTITWRNNGRDNLYDVVDPGYSYWCKTTQRCPGQADRTVTTHYDRFHRSTQE
TRAQGKQVTRTQIVYHGELGDPFSKQPPIYLMANTVTTSWEMEDDANKKRFETITTEYDR
EGNLTKEIQQDGGYTVLEYYDANGEPGKCPADPNGFKKHVKSQTVYPSTLANVVEGATVL
RTDFTYGALGTLQGRIDLPEHGEIASTWLAIEQEVLTDAANPQALRALSTVKRTYLSSPS
NAHYHGRMSKRETTLHAGHDGTKLGKVLADTTTTLEWKFSLSSHKALGDVLQTTQTTIGH
NLSQKVSKQSQHPLTGQVLENLDIHDTVTRFSYDTSNRLTSETSAPDDDEKRATVRYRYA
VSAEQNLQETEDNLGVISRVLFDGLNRIIKEERVCEAVASKARQQQTYQVYSAAYNAFGQ
LENETTYDQLPDRELALTSQHRYDNWGNRCATVRPDGVTVFTDRSPFGAEGDIVTTWEEY
PDQPGVRNSQSTTSFNRFDKPEQVQTLDEHGASASTRAYSYDGFGRSVAETYTFGVPASG
KHTARAEHKRTTGYRYDIWGRMQRTDRADGSALSREFAHHSTDELATTLLLHPQRNDKGR
SVCGREFDDIDRLVKVTVGRHQETREYSGSQLLPEKRIMGSGRTFNYEYDLAVGTAPTRI
TAGKNQKPSSFKYSMASAAITEAQNEQGTRSYSYTDQGYLLSESWADKQSGDVYTRDFVY
SLQGRMLTCSDSDNSRKAYEYDELGRLHSITQGTLQAVFTYNSAGLLHTTLTTNNAEAAN
PQKLLCTQAYDHRGRETSRTLKLSRLDTTLDERALEQVWRDDNMLHSRTLIKAGTAVLTE
RFDYDDRDRLYNHRCEGSALPTNSKGRAITNQAFEFDAYDNIYLCRSEFADGEVDEAFYE
YFEDLPFQLKSVSHTLTADYPALVKFSEDDYDADGNMLKDEQGNRLVYDEDTGQLASAAA
PGGTALANFRYDGHGQLLGVRHGAQAEEQRRYEGYRVSSTLRDGLLTEYLFAGDSPLGLQ
QSGKSNETRLYMASNNNSVIGECAANDEVHEANYSAYGEVQEGKLLGLLGFNAEAREQAL
GWYLLGRGYRAYNPSLMRFHSPDNLDPELAGINPYVYCLGNPVMWQDPTGHYSRGWGSND
DPVKEKQKRGAEFWLNIGVLVMNIGLTIGFAVMTAGAATPLVIGVLAVGITATLASAATQ
VAAEFVKDPEKKKKLGIASMSLSIIGTMTLTAGMVKAGFDKRAAARRQSVAEVGDAGGAG
DGGLRRNSTRSNGAQTDDISPVEDNLPADINQPSARSSSADRNPPPAPALPQRAALEPTP
DYDRSPRGSLITVKMEQTDIMGVPLAPISSSRLLAVTGTRVKSAIPGGARTNSFATPEAA
QAFANTLQK
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatggccgcgcactccaatgccaataacttcgccgtcgaaaagcgtgtcgac
ccacgtaccggccaatatgggctgagcatcgcgattcctgaattggttgccgacagcggc
gccggtgccagtttctcgctaaacctggcctacaactcaatggccgcgggcgatgtcggg
tatggcgaaggatgggatttgaacctttcccgctttgtcgagcatgcctaccctgaaggc
ggtggcgccctgtcgctgtttaccggcgaacagttcaccgtggacggcatcgagagcatc
agcgagaaaaaactcgataccttccacttccacaaggatggcgaagggcgcttccgcgtc
gtgcaccgtagcggcgtggtcgaaatactcgaagagatgggcgcgggcgcacagcgtgcg
gccttgccgacacgcatctacgcaccgtccgggcactggctcgaactcacctacgcaagc
aactcggttaccccgggttggttttgcttgacgcacgtacacagcgggcatcccgatggc
gcaggtaaaggccgcctgttgctgcaggtcgcctacggcggcacgactgagttcaccctg
taccctggcgccgctgatgtgcaagccagccaggtactgaagttcaaggggcgacaactg
cagaatgtggtactgcccgaccagactcagtggcaattcgactaccagaccgtgcatggg
cagacctgcgtgaccaaagtggtctcgcccacaggcgctgtagagcacatcgaatacggc
atcgacggggatcctggccatgcattgccgggcgtcgacaagaagctgccacgggtcaaa
cgccatcgcgttcagccagggcaaggccagccggaaatgcgcacggactatgactactcc
actgaaaacttcatgggtaatggcagcaccattacctggcgcaacaacgggcgcgacaat
ttgtacgacgttgtcgacccaggctacagctattggtgcaagaccacccagcgttgcccg
ggccaggctgaccgcaccgtcaccacccactacgaccgcttccaccgcagcacccaggaa
acccgcgctcagggcaaacaggtcacccgaacccaaatcgtctatcacggcgagttgggc
gaccccttcagcaaacagccgcccatttacctgatggcgaatacggtaacgacctcttgg
gaaatggaggacgatgccaacaaaaagcgctttgaaaccatcaccaccgaatacgatcga
gagggtaacctcaccaaggaaattcagcaggatggcgggtacaccgtgctggagtactac
gacgccaacggcgaacctggcaaatgccccgctgatccgaacggcttcaagaagcatgta
aaaagccagacggtctacccgagcacgcttgccaacgtggtagaaggcgccaccgtgcta
cgcaccgattttacctatggtgcgctggggaccctgcagggtcgcatcgacctgcccgaa
cacggcgaaatcgcctcgacatggctggccatcgaacaggaagtgctgacggacgccgcc
aacccgcaggccctgcgcgcccttagcacggtcaaacggacctacctcagcagccccagc
aatgctcactaccacggccgcatgagcaaacgtgaaactacactgcatgccgggcatgat
gggacgaagctgggtaaagtgctggccgacaccaccacaacgcttgagtggaagttcagc
ctctcctcgcacaaggcgctgggcgatgtcctgcagaccacccagacgaccatcgggcat
aacctgagccagaaggtttctaaacagagccagcatccgctgacaggccaggtgctggaa
aacctcgacattcacgacacggtcacgcgcttcagctatgacacaagcaatcggctgacc
agcgaaacctccgcaccggacgatgacgaaaagcgcgccactgtccgctatcgctatgcc
gtgtcggctgagcagaaccttcaggaaaccgaagacaacctgggcgtaatcagccgcgtg
ttgttcgacggcctcaaccgcatcatcaaggaagagcgggtatgcgaggcggtggcctcg
aaggccaggcaacaacagacgtatcaggtttattccgccgcttacaacgccttcggccag
ctggaaaacgaaaccacctacgaccaactgcccgaccgcgaactggccttgaccagccag
catcgatacgacaactggggtaaccgttgcgctaccgtgcgcccggacggggtgaccgtg
ttcaccgaccgctccccgttcggcgccgagggggatatcgtcaccacctgggaggagtac
ccggaccaacccggtgtgcgaaatagccagagcaccacctccttcaatcgcttcgacaaa
ccagaacaggtgcaaacgctggatgagcacggtgcctcggcatcgacacgcgcctacagc
tatgacggctttggccgcagcgtcgcagaaacctataccttcggcgtgccggcaagcggc
aagcacaccgcacgtgccgaacacaaacgcaccaccggttacaggtacgacatctggggg
cgcatgcagcgcaccgatcgcgcggacggctcggcgttgagccgggagtttgcccaccac
agcaccgatgaactggcgaccaccctgctgctgcacccgcaacgcaacgataaagggcgt
tcggtgtgtggacgcgagttcgacgatatcgaccgcctggtcaaagtgaccgttggccgc
caccaggaaacgcgcgagtacagcggctcacagttgctgccagagaagcgaatcatgggc
tctggccgcacgttcaactacgagtacgacctggcggtcggcaccgcgccaacacgtatc
acagcggggaaaaaccagaagccttccagcttcaagtacagcatggcctccgcagccatt
accgaagcgcagaacgagcaaggtacacgcagctacagctacaccgaccagggttacctg
ctgagtgaaagctgggcagacaaacaatcgggcgatgtctacacgcgcgacttcgtctat
tcgttgcaagggcgcatgctgacgtgcagcgacagcgacaacagccgaaaagcatacgaa
tacgatgaacttggcaggctgcactcgatcacccaaggcacgctgcaagcggtattcact
tacaacagtgcaggcctgttgcataccacgctgaccaccaacaacgccgaggccgccaac
ccgcagaaactgctgtgcacccaggcctatgaccaccgcggccgggaaacgtcgcgcacc
ctcaagctgagccggcttgacaccaccctcgatgagcgcgcgctcgaacaagtgtggcgc
gacgacaacatgctgcacagccgcacgctgatcaaagccggtacggcggtgctgacggag
cgctttgattacgatgaccgtgaccgcttgtacaaccacaggtgtgaaggcagcgcgctg
cctaccaacagcaagggccgtgcaatcaccaaccaggcgtttgagttcgacgcgtacgac
aatatctacctttgccgcagcgagttcgcggatggcgaagtcgacgaagcgttctacgaa
tacttcgaagatttaccgttccagctgaaaagcgtaagccatacgctgacagccgattac
cccgctttggtgaagttcagcgaggacgattacgacgccgatggcaacatgctcaaggac
gagcagggcaaccgcctggtgtacgacgaggataccggccaactggccagcgctgcggca
ccgggcggcacggccctggccaacttccgctatgacggccacgggcaactgctgggcgtg
cgccacggtgcgcaggccgaggagcaacggcgttacgagggctatcgggtcagcagcacc
ttgcgcgatggcttgctcaccgagtacctgtttgcaggcgactccccgctggggctgcaa
cagtcgggcaaaagcaacgagacacgcctgtacatggccagcaacaacaacagcgtcatc
ggcgaatgcgcggccaatgatgaggtgcatgaagccaactacagcgcctatggggaggtg
caggaaggcaagctgctgggcctgctgggcttcaatgccgaagcgcgcgagcaggcactg
ggctggtacctgctggggcgcggctaccgtgcctacaaccccagcctgatgcgcttccat
agcccggataacctggaccctgaactggcgggcatcaacccatacgtgtactgcctgggc
aacccggtcatgtggcaggaccctaccgggcattacagccgcggctggggctcgaacgat
gacccggtgaaagagaagcagaagcgcggggctgagttctggctgaacattggcgttttg
gtaatgaacataggcttgaccattggctttgccgtgatgaccgcaggtgccgccaccccg
ctcgtcattggcgtactggcggtaggtatcaccgcaacgcttgcatcggcggctacacag
gttgccgcggagtttgtgaaagacccggaaaagaaaaagaaattgggcatcgcgtctatg
tcactgtccatcatcggcacgatgacgttgacggcagggatggtcaaggcagggttcgac
aaacgtgctgcggccaggaggcaaagcgttgccgaagtgggggatgctgggggtgccggt
gacgggggcctacggcgtaacagcacaaggagcaacggggcccaaacagatgacatttca
ccagtagaggacaatttgccagcggacataaatcagccgtctgcgcgctcatcgagcgcg
gatcgtaatccacctccagctccagctttgccacaacgtgccgcacttgaaccaacccct
gactacgacagatcaccacgtggctcattgatcacggttaagatggagcaaacggacatc
atgggtgttcccttggctccaattagtagctccagacttctcgcggtcaccgggactagg
gtgaaatcagccattccaggaggggcacgtactaactccttcgctactccagaagctgcc
caggcgtttgctaacacgcttcaaaaataa
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