Pseudomonas putida GB-1: PputGB1_1556
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Entry
PputGB1_1556 CDS
T00650
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppg03400
]
PputGB1_1556
DNA repair and recombination proteins [BR:
ppg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PputGB1_1556
Archaeal homologous recombinant proteins
PputGB1_1556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
AAA_15
nSTAND3
MMR_HSR1
RsgA_GTPase
cobW
AAA_22
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ABY97461
UniProt:
B0KFC1
LinkDB
All DBs
Position
complement(1750057..1753701)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPVEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR
LNDIGREAKVPDADGEIPTSDPRNLLRRGTGSGFAEVDFVGIDGRRYRARWEANRARDKA
NGKLQLSRQSLYDLDSEQVLASAKNEFKPLVEASLGLNFEQFTRAVMLAQSEFGAFLKAD
DKERSELLEKLTNTAIYTRLGQRAFSKAREAGEAHKALNDRASHLLPMAVEARTELDQRL
EQAQQQFKADQTGERQLEQQRSWLNEQRQLQAQHVEAGTALQAAEQGWQLLAEPRLDLVR
LERLAPQRHQFHRQQALSAQLAPVAAKIAEQQQQQDALQVRTHELEQALNAARQALADRQ
AQHGENTPRLRQAFAAQDNLARLDQELAAQRSSNQQAEQQVADGQQQLQQLEDNQQRSLQ
QLAQIDTALADSQHLAGLADAWHAYLPQLKQVMLIGGRLSKGRDELPGLQALASQANAHL
QAERDAYDLLFREAKAEPQALAEQIDLLGGMLQDNRKQQRAVEELSRLHARERELRQQLD
AARERQQQAMQQRQQLITEGTAAKAELEAAEQALTLTRQLLERQRLARNTSVEELRGQLR
DGEPCPVCGSAEHPFHQPEALLQSLGRHDQAEEDAAQKQVESLNSKLVELRTQLGVVNAQ
LKDYQQQQQHLSEQLQPIVAQVQAHSLWPALAPQDDIARSTWLDSQLRRLDEHIGQDEKR
QKVLLALQKDAARLNQQLQAAHDAQQQAQRHLEQQHQALANDEQQLQQGLSDLAGVLPEE
ALKALNEDPANAFLALDQQIALRRQHLEQRKDEQEEQQARQTQLDKLRDQQQARVQGQQQ
LQQKLATLDEQRQQAQASLGELLGEHASAEAWQQHMDTALEQARALDADTAQRLQELRTQ
GVQLASELKANAQQQQALTSECQQLQGQITQWRSEHPELDDAGLDRLLGMDDAQVNELRQ
RLQNAEKAIEQGRVLLQEREQRLQQHAAQMTVDTSVEALEQALTELRERLTLHEQQCAEL
RALQADDQRRQQAHQALAAEIDEARQQWQRWGRLNDLIGSASGDVFRKIAQGYNLDLLLH
HANAQLRQLARRYRLKRGGSALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSDVEVCG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccatccgcctgaagaacctggcatcgctggccggcccggtcgaaatt
gacttcaccgcagaacccttggccagcgcgggcctgttcgccatcaccgggccgaccggt
gccggcaagagcaccctgctcgacgccttgtgcctggcgttgtttggcaccgtgccacgg
ctcaatgacatcggccgagaggccaaggtgccggatgccgacggcgaaatccccacgtca
gacccgcgcaacctgctgcgccgtggcaccggcagcggttttgccgaggtcgatttcgtc
ggcatcgatggccgccgctaccgtgcccgctgggaagccaaccgcgcccgcgacaaagcc
aacggcaaactgcaacttagccgccagagcctctacgatctcgacagcgagcaagtactg
gccagcgccaagaacgagttcaagccactggtcgaggccagtctgggcctgaacttcgag
cagttcacccgtgcagtgatgctggcccagagcgagttcggcgcgttcctcaaggccgac
gacaaagagcgcagcgaactgctggaaaagctcaccaacaccgccatctacacccgcctg
ggccagcgcgccttcagcaaggcgcgtgaagccggcgaggcgcacaaagccctgaatgac
cgcgccagccacttgttgccgatggccgtcgaagcccgtaccgagctcgaccaacgcctg
gagcaggcgcagcaacagttcaaggccgaccaaaccggcgagcgccaacttgagcagcaa
cgcagctggctgaatgagcaacgccagctgcaagcccagcacgtcgaagccggcaccgca
ctgcaggccgctgaacagggctggcagttgctggccgaaccccgcctggacttggtacgc
ctggagcgcctggcgccacaacgtcaccaatttcatcgccaacaggcactcagcgcacaa
ctggcgccagtggccgcgaaaattgccgagcagcaacagcagcaagacgcactgcaggtg
cgtacccacgagctggagcaggcgctgaacgctgcccgccaagcgctggccgatcgccag
gcccagcatggcgaaaacaccccacgcctgcgccaggcctttgccgcccaggacaacctg
gcccgcctggaccaggagttggccgcccagcgcagcagcaaccaacaggctgaacagcaa
gtcgctgacggccagcagcagctgcagcagttggaagacaatcagcagcgcagcctgcag
caactggcacagatcgacaccgcgcttgccgacagtcagcacctggcgggcctggccgat
gcctggcacgcctacttgccgcaacttaaacaggtgatgctgataggcggccgcctgagc
aaaggccgcgacgagctgcccggcctgcaggccctggccagccaggccaatgcacacttg
caggccgagcgtgacgcctacgacctgctgttccgcgaggccaaggccgaaccacaggcc
cttgccgagcagatcgacctgctgggcggcatgctgcaggacaaccgcaagcagcagcgc
gccgtcgaggaactgtcgcgcctgcacgcccgtgaacgggagctgcgccagcagttggac
gccgcgcgcgaacggcagcagcaggccatgcagcagcgccagcagctgattaccgagggc
accgccgccaaggccgagctggaggccgccgaacaggcgctcaccctcacccgccagttg
ctggagcgccagcgcctggcacgcaacaccagcgtcgaagaactgcgtggccaattgcgc
gacggcgaaccctgcccggtatgcggcagcgccgaacacccgttccatcagcccgaagcg
ctgctgcagagcctgggccgccatgaccaggccgaagaagacgccgcccagaaacaggtc
gaaagcctcaacagcaaactggtggagcttcgtacccagctgggtgtggtcaatgctcaa
ctcaaggactaccagcagcaacagcaacacctgagcgaacagctgcagccaatagtggcc
caggtacaggcgcacagcctgtggcctgccctcgccccgcaggacgacatcgcccgtagc
acctggctcgacagccaactgcggcgcctggacgaacacatcggccaggacgagaagcgc
caaaaagtcctgctagccctacaaaaagacgccgcccgcctcaaccagcaactgcaggcc
gcccacgacgcccagcagcaggcccagcgccacctggagcaacagcaccaggccctggcc
aacgatgagcagcagttgcagcaaggcctgagcgacctggccggggttctgcccgaggaa
gccctcaaggccctgaacgaagacccggccaatgccttcctggcccttgaccagcaaatt
gccctgcgccggcaacacctggaacagcgcaaggacgaacaggaagaacagcaagcccgc
caaacccagctggacaaactgcgcgaccaacaacaggcgcgcgtgcaaggccagcagcag
ttgcaacaaaagctggctaccctcgacgagcaacgccagcaagcccaggcctcgctcggc
gagctgctcggcgaacatgccagcgccgaagcctggcaacagcacatggacaccgcgctg
gagcaagcccgtgcccttgacgccgacaccgcccagcgcctgcaggaactgcgcacccag
ggcgtacaactggccagcgagctcaaggccaatgcccagcagcaacaggcgctgaccagc
gaatgccagcagttgcagggccagatcacccaatggcgcagcgagcacccggaactggat
gacgccgggctggaccgcctgctgggcatggatgatgcccaggtgaatgaactgcgccag
cgcctgcaaaacgctgaaaaggccatcgaacaaggccgggtgctgctgcaggaacgtgag
cagcgcctgcagcagcacgccgcgcaaatgaccgtggacacctcggtcgaagccctggag
caagccctgaccgagctacgcgagcgcctgaccctgcacgagcaacagtgcgcagaattg
cgcgcgctgcaggccgacgaccagcgccggcagcaggcccaccaagcactggcggcagaa
atcgatgaggctcgccagcaatggcaacgctggggtcgcctgaatgacctgatcggttcg
gcttcgggcgacgtgttccgcaagattgcccaaggctacaacctcgacctgctgctgcac
cacgccaacgcccagctacgccagctggcccgccgctaccgcctcaagcgcggcggcagt
gccctgggcctgctggtactggataccgagatgggcgacgaactgcgttcggtgcactcg
ttgtcgggcggggaaaccttcctggtatcgctggccctggccctgggcctggcgtcaatg
gcctccagcaccctgcgcatcgaatcgctgttcatcgacgaaggcttcggcagcctcgac
cccgagtcgttgcaacttgccatggacgccctcgacggcttgcaggcccaaggccgcaag
gtggcggtgatttcccacgtgcaggaaatgcacgagcgcatcccggtgcagatccaggtg
cggcgccagggtaatggcctgagtgacgtggaggtgtgtgggtga
DBGET
integrated database retrieval system
