Pseudomonas putida GB-1: PputGB1_1672
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Entry
PputGB1_1672 CDS
T00650
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppg01011
]
PputGB1_1672
Enzymes [BR:
ppg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PputGB1_1672
Peptidoglycan biosynthesis and degradation proteins [BR:
ppg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PputGB1_1672
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
TPR_19
Motif
Other DBs
NCBI-ProteinID:
ABY97575
UniProt:
B0KH70
LinkDB
All DBs
Position
complement(1891903..1893828)
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AA seq
641 aa
AA seq
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MRSRLLHIASCLLLTAATCAAQATDLTLQRQYYDEAKRALAKGDKGPYLRYAQALSDYPL
TPYLAYDELTARLKSASNQEIEGFLAKHGDLPQANWMKLRWLRWLAERGEWDTFVKYYDP
KLNFTELDCLNGQYQLSHGLRAEGYATADKLWNVGKSQPAACDTLFGMWAAEGQLTEAKR
WERTKLAAQARNYGLANNLVKTLTTLGPQGSLLVDVAQKPELLNQPSRFTPVNEAMSDVV
SLGLRRLARQDPERAMALLDDYAQRMHFSRDEKVAIAREIGLTLARRYDPRALDLMTRYD
PELRDNTVSEWRLRLLLRLGRWEDAYELTKRLPQDLASSSRWKYWQARSLELAQPNNPQI
PLLYKTVARERDFYGFLAADRAQTPYQLNNKPLPLSPQLVKKVRNTPGIQRALEFHARGQ
IVEGRREWYHVSRHFTRDEMVAQARLGYELRWYFPAIRTISQAQYWDDLDIRFPMAHRDT
LVREAKVRGLHSSWVFAITRQESAFMEDARSPVGASGLMQLMPATAKETARKFSIPLASP
AQVLNPDKNIQLGAAYLSQVHSQFNGNRVLASAAYNAGPGRVRQWLKGAKHLSFDVWVES
IPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERYFDDM
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccgcctgttacatattgcatcctgcctgctgcttaccgccgccacctgcgcg
gcgcaggccaccgacctgaccctgcaacgccagtattatgacgaggccaagcgtgcgctg
gccaaaggcgacaaaggcccctacctgcgctatgcccaggccctgagcgactacccgctg
acgccctacctggcctacgacgagctcaccgcccgcctgaaaagcgccagcaaccaggag
atcgaaggttttctcgccaagcatggcgacctgccccaggccaactggatgaagctgcgt
tggttgcgctggctggccgagcgcggcgagtgggacaccttcgtcaagtactacgacccc
aagctcaacttcaccgaactggactgcctcaacggccagtaccagctcagccacggcctg
cgcgccgaaggctacgccaccgccgataagctgtggaacgtcggcaagtcgcaacccgct
gcctgcgacacactgttcggcatgtgggcagccgaaggccagctgaccgaggccaagcgc
tgggaacgcaccaaactggcggcccaggcacgcaactatggcctggctaacaacctggtc
aaaaccctgactaccctcggcccgcaggggagcctgctggtcgacgtggcgcagaagccc
gagctgctcaaccagccgtcacgcttcaccccggtcaacgaagcgatgtccgacgtggtc
agcctcggccttcgtcgcctggcccggcaggacccggagcgagccatggcgctactcgac
gactacgcccagcgcatgcacttctcccgcgacgaaaaggtggccatcgcccgcgaaatc
ggcctgaccctggcgcgtcgttacgacccgcgcgcgctcgacctcatgacccgctacgac
cccgagctgcgcgacaacaccgtcagcgaatggcgcctgcgcctgctgctgcgcctgggc
cgctgggaagacgcctacgagttgaccaaacgcctgccccaggacctggccagcagcagc
cgctggaagtactggcaggctcgcagcctggagctggcacagccaaacaacccgcagatt
ccactgctgtacaagaccgtggcgcgtgaacgcgacttctatggtttcctggccgccgac
cgggcacagacgccttaccaactgaacaacaagccgctgccgctgagcccgcaactggtc
aaaaaggtgcgcaatacgcccggcattcaacgcgcactggaattccacgcccgtggccag
atcgtcgaaggccgccgcgagtggtaccacgtcagccgtcacttcacccgcgacgaaatg
gttgcccaggcacgcctgggctatgagctgcgctggtatttcccggctatccgtaccatc
agtcaggcgcagtactgggacgacctggacatccgcttcccgatggcccaccgcgacacc
ctggtacgcgaggccaaagttcgcggcctgcattcgagctgggtattcgccatcacccgc
caggaaagcgccttcatggaagacgcacgctcaccggtgggcgccagcggcctgatgcaa
ctgatgccggccaccgccaaagagaccgcgcgcaagttcagcatcccgctggcatcaccc
gcgcaagtgctgaacccagacaagaacatccagctgggtgcggcctacctgagccaggtc
cacagccaattcaacggcaatcgagtgctggcttcggcggcctacaacgccggccccggg
cgcgtgcgtcagtggctcaaaggcgccaagcacctgagtttcgatgtatgggtggagtcg
atcccgttcgacgaaacacgccagtatgtgcagaacgtgctgtcgtattcggtgatctac
gggcagaagctgaattcgccacagccgctagtggattggcatgagcggtatttcgacgac
atgtaa
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