Pseudomonas putida GB-1: PputGB1_1676
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Entry
PputGB1_1676 CDS
T00650
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg00071
Fatty acid degradation
ppg00280
Valine, leucine and isoleucine degradation
ppg00310
Lysine degradation
ppg00362
Benzoate degradation
ppg00380
Tryptophan metabolism
ppg00410
beta-Alanine metabolism
ppg00640
Propanoate metabolism
ppg00650
Butanoate metabolism
ppg00907
Pinene, camphor and geraniol degradation
ppg00930
Caprolactam degradation
ppg01100
Metabolic pathways
ppg01110
Biosynthesis of secondary metabolites
ppg01120
Microbial metabolism in diverse environments
ppg01200
Carbon metabolism
ppg01212
Fatty acid metabolism
Module
ppg_M00087
beta-Oxidation
ppg_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PputGB1_1676
00650 Butanoate metabolism
PputGB1_1676
09103 Lipid metabolism
00071 Fatty acid degradation
PputGB1_1676
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PputGB1_1676
00310 Lysine degradation
PputGB1_1676
00380 Tryptophan metabolism
PputGB1_1676
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PputGB1_1676
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PputGB1_1676
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PputGB1_1676
00930 Caprolactam degradation
PputGB1_1676
Enzymes [BR:
ppg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PputGB1_1676
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PputGB1_1676
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PputGB1_1676
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PputGB1_1676
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NfeD1b_N
SDH_protease
Motif
Other DBs
NCBI-ProteinID:
ABY97579
UniProt:
B0KH74
LinkDB
All DBs
Position
1897562..1899709
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AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVEAIQADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRVMSNSAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIAAGKENRAEDAL
KVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
DDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVFDATVLDVLKPIVFEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgagctc
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgcctgaccctgaacgagctg
cgccaggccgtcgaagccatccaggccgacgcctcggtcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagctg
cccgaggccgaactggtcgccggcaacctggaagccaaccgcatcttcaacgcctttgaa
gacctcgaagtgcccaccgttgccgccatcaacggcatcgccctgggcggcggcctggaa
atgtgcctggcagccgactaccgggtcatgtccaacagcgccaagatcggcctgccagaa
gtcaagctgggtatctaccctggcttcggcggcaccgtgcgtctgccacgccttatcggc
tcggacaacgccatcgagtggatcgccgccggcaaggaaaaccgtgccgaggacgccctg
aaagtgggtgccgttgacgccgtggtcgcccctgagctgctgctggccggtgctctcgac
ctgatcaagcgcgccatcagtggcgagctggattacaaggccaagcgccagccaaagctg
gagaaactcaagctcaacgccatcgagcagatgatggccttcgagaccgccaagggcttt
gtcgccggccaggccgggccgaactacccagccccggtcgaagccatcaagtccattcag
aaagccgccaacttcggtcgcgacaaagcgctggaagtcgaagccgcaggctttgccaag
ctggccaagacttcggtcgccgagagcctgatcggcctgttcctcaacgaccaggagctc
aagcgcaaggccaaggcgcatgacgaaatcgcccatgacgtgaagcaggccgccgtgctc
ggcgccggcatcatgggtggcggcattgcctaccagtcggcggtcaagggcaccccgatc
ctgatgaaggacatccgcgaggaagccatccagctgggcctgaacgaggcctccaagctg
ctcggcaaccgcgtcgagaagggccgcctgaccccggccaagatggccgaggcactcaac
gccattcgcccgaccctgtcctatggcgatttcgccaatgtcgacatcgtcgtcgaggcc
gtggtcgagaacccgaaggtcaagcaagcggtactggcggaagtggaaggccaggtgaag
gacgatgcgatcctcgcctccaacacttcgaccatttccatcaacctgctggccaaggcg
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgattcgtggcgagaagtccagtgaagtggcggttgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggctttttggtc
aaccgcgtgctgttcccttacttcggcggcttcgccaagctggtcagtgccggtgtcgac
ttcgtgcgcatcgacaaggtaatggaaaagttcggctggccgatgggcccggcctacctg
atggacgtggtcggtatcgacaccggccaccatggtcgcgacgtaatggccgaaggtttc
ccggaccgcatgaaggacgagcgccgctcggccgtcgatgcgctgtacgaggccaaccgc
ctgggccagaagaatggtaaaggcttctacgcctacgaaaccgacaagcgcggcaagccg
aagaaggtcttcgacgccaccgtgctcgatgtgctcaagccgatcgtgttcgagcagcgt
gaagtcaccgacgaagacatcatcaactggatgatggtcccgctgtgcctggagaccgtg
cgctgcctggaagacggcatcgtcgaaaccgctgccgaagccgatatgggcctggtctac
ggcattggtttccctcccttccgcggtggtgcgctgcgttacatcgactcgatcggtgtt
gccgaattcgtcgccctggccgatcagtatgccgatctggggccgctgtaccacccgacc
gccaagctgcgtgaaatggccaagaacggccagcgcttcttcaactga
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