Pseudomonas putida GB-1: PputGB1_2064
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Entry
PputGB1_2064 CDS
T00650
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppg03016
]
PputGB1_2064
Enzymes [BR:
ppg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PputGB1_2064
Transfer RNA biogenesis [BR:
ppg03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PputGB1_2064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
Motif
Other DBs
NCBI-ProteinID:
ABY97965
UniProt:
B0KLI8
LinkDB
All DBs
Position
2316786..2317331
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AA seq
181 aa
AA seq
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MVQDIRPSGSPFKRLFFALPVNDAQRSALAQWRRDLSLRSGKPVPAANFHVTLLFLGDVD
AAQLPAICAAVDQLALPATAPRLLLDRLQVWQRAGALVLEAQQTPPALLHLVYGLQQALL
PLGVEAASREYRPHLTLSRDYHGQPPEASSAPEFYLTARHFTLYESRKGAYWPLAQWPLA
Q
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggttcaggatatacgccccagcggtagcccgttcaaacggctgttcttcgccttgccg
gtcaacgatgcccagcgcagtgctctggcccaatggcgccgggacctgagcctgcgcagc
ggcaaaccggtgccggcagccaatttccacgtcacgctgctgttcctcggtgatgtggac
gccgcccagctgccagcgatctgcgcggcggtcgatcaactggcgctgccggccacggcg
ccgcggctgttgctcgaccgtttgcaggtgtggcagcgggccggggccctggtgctggag
gcacagcagacaccgccggccctgttgcacctggtgtacggcttgcagcaggcgctgctg
ccgctgggggtggaggcggccagccgtgagtatcggccgcacctgacgctgtccagggac
taccacggccagccacccgaggccagcagcgcgccggagttctacctcaccgcgcgacac
ttcacgctttacgagtcgcgcaagggcgcctactggccattggcgcagtggccgctggcg
caatga
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