Pseudomonas putida GB-1: PputGB1_2545
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Entry
PputGB1_2545 CDS
T00650
Name
(GenBank) AlkA domain protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PputGB1_2545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppg03400
]
PputGB1_2545
Enzymes [BR:
ppg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PputGB1_2545
DNA repair and recombination proteins [BR:
ppg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PputGB1_2545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
EAD2
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ABY98444
UniProt:
B0KRT0
LinkDB
All DBs
Position
2857215..2858192
Genome browser
AA seq
325 aa
AA seq
DB search
MLVHGLTLKVFWHDPPMPTLTRQHAVRRSLPTPGHHTLWLRYRAPYHWPSTLGFLAARCI
PGIETCHDGTYSRTLIVAGHHAVLHATPMTNQHLRVRLEGAPSNALPGLIARLRRVFDLD
ADPARISAELSCDPLMASLLKARPGLRVPQGWDACEQAMRTVLGQQISVAGAMTLAGRLV
QRHGAPLRLSAPGLSHVFPALPTLANAQFENMGMPSARATTLATLANALLADPGLLRRGQ
VLDELLRNLCRLKGIGPWSAHYLALRQAGAADALPLGDVALIKALRLLEGDEAQLAERAL
DWRPWRAYAAQHLWASLGPAGTTRR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtacatggcttgaccctcaaggttttctggcatgatccacccatgcccaccctc
actcgacagcacgccgtgcgccgatcattgcccacccccggccaccacaccctgtggctg
cgctaccgtgccccctatcattggccctcgaccctgggcttcctagccgcccgctgtatc
cccggcatcgaaacctgccacgacggcacctacagccgcaccctgatcgttgctggccac
cacgccgtcctgcacgcgacgccaatgaccaaccaacacctgcgcgttcgccttgaaggc
gcgccttcaaacgcgctgcccggcctgatcgccaggctgaggcgggttttcgaccttgac
gccgaccctgcacgcatcagcgccgagctgtcttgcgaccctttgatggcaagcctgctc
aaggcgcgcccggggctgcgtgtgccgcaaggctgggacgcctgcgagcaagccatgcgt
accgtacttggccagcaaatcagcgtggccggcgccatgaccctggcgggccggctggtc
caacgccacggcgccccgctgcgtctgtcggcaccgggcttgagccacgtgttcccggct
ctaccgacattggcaaatgcacagttcgaaaacatgggcatgccgagcgcgcgcgccacc
accctcgccaccctggccaacgccttgctggccgaccccggcttgctgcgtcgcgggcaa
gtgctggatgagctattgcgcaacctgtgccggctaaagggtatcgggccgtggagcgcc
cactacctggcgctgcgtcaggccggcgccgctgatgccttgccgctgggtgacgtagcc
ttgatcaaggcgttgcggttgcttgagggcgacgaggcgcaactggccgaaagggcactg
gactggcgcccgtggcgggcttatgcggcgcagcacttgtgggcctcgctggggccggca
gggaccactcgtcgttaa
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