Pseudomonas putida GB-1: PputGB1_3225
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Entry
PputGB1_3225 CDS
T00650
Name
(GenBank) type VI secretion protein, EvpB/VC_A0108 family
KO
K11900
type VI secretion system protein ImpC
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PputGB1_3225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppg02044
]
PputGB1_3225
Secretion system [BR:
ppg02044
]
Type VI secretion system
Imp/Vas secretion system core components
PputGB1_3225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
ABY99117
UniProt:
B0KHN5
LinkDB
All DBs
Position
3613082..3614572
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AA seq
496 aa
AA seq
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MPKPSNTNISEDTTTGTISNATLLDQIMAETKLIPTHEGYQVARHGVSAFIAEILKSNDP
DQLINKHRVDQMIAEVDRVLGKQMDAILHHPEFQQLESSWRGLKILVDRTDFRENIKLEV
LHANKEDLLDDFENAADITCSGIYKHVYTAGYGQFGGEPIAAMVGNYSFGPSSPDIKLLS
YMASVGAMSHAPFLAAPSPEFFNLSSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHV
ALTGPRFMLRSAYHPQEKPIESFNYHENIAGQHDNYLWGNSTFLLASCINDSFARYRWCP
NIIGPQSGGAVEDLPVHLYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNA
AFFSANSVQKPKNFPKTPEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKER
RDLESELNKWIKQYVADQENPSADVRSRRPLRAAKVEVSDVAGDPGWYQVSLAVRPHFKY
MGANFEISLVGRLDTQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcctagcaataccaacatcagcgaagacacaacgaccggcacgataagcaat
gccaccttgctcgaccagatcatggcagaaaccaaactaatacccacgcatgagggctat
caggttgcccggcatggcgtatctgccttcatcgccgaaatcctcaaaagcaatgacccg
gatcagttgatcaacaagcaccgggtcgaccagatgattgcagaggttgaccgggtactc
ggcaaacagatggatgccattctgcatcatccagagttccagcagcttgaatcttcatgg
cgcggcctgaaaatcctggtagaccgcaccgacttcagggagaacatcaagctcgaagtg
ctgcatgcgaacaaagaagacctgctcgatgacttcgaaaatgctgcagacattacctgc
agcggcatttacaaacatgtttataccgcaggttacggtcaattcgggggcgagccgatt
gcggccatggttggtaactacagcttcggcccctcttcgccggatatcaaactgctgagt
tacatggcctccgtaggcgccatgtctcacgcacctttcctggccgcgccttctcctgag
ttcttcaacttgagcagcttcgaagaactgcccaatctcaaggaaataaaagacctcttc
gccggccctcggcacgccaaatggcgcgcattccgtgaaagcgaagacgcccgtcatgtc
gctttgaccgggccgcgtttcatgctccgctccgcctaccacccgcaggaaaaaccgatc
gagagcttcaattatcacgaaaacatcgccgggcagcatgacaactacctgtggggcaac
tccaccttcctgctggccagttgcatcaatgacagcttcgcccgctaccgctggtgtccg
aacatcatcggtccgcaatcgggcggcgccgtcgaagacctgccagtccatctgtacgag
tccttgggccagttgcaggccaagattcctaccgaggttctgatctccgaccgcaaagaa
ttcgaactggcggaagagggtttcatcgccctgaccatgcgcaaagacagcgacaacgcc
gcgttcttttcggccaactcggtgcagaaacccaagaacttcccgaaaacccccgagggg
ctacaggcacagaccaattacaaactgggtacccagttgccctacctgttcatcgtcaac
cggctggctcactacatcaaggtgctacagcgcgaacagattggcagttggaaagagcgc
cgcgaccttgagtccgagcttaacaagtggatcaagcagtacgtcgcggaccaggagaac
ccgtctgccgatgttcgcagtcgccggccgcttcgtgccgccaaggtcgaggtatcggat
gttgccggtgacccaggctggtaccaggtttcgctcgctgttcgcccacacttcaagtac
atgggcgcgaatttcgaaatttccctggtcggacggctcgatacgcaatga
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