Pseudomonas putida GB-1: PputGB1_3231
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Entry
PputGB1_3231 CDS
T00650
Name
(GenBank) type VI secretion protein, VC_A0114 family
KO
K11893
type VI secretion system protein ImpJ
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PputGB1_3231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppg02044
]
PputGB1_3231
Secretion system [BR:
ppg02044
]
Type VI secretion system
Imp/Vas secretion system core components
PputGB1_3231
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
aSelB_III
Motif
Other DBs
NCBI-ProteinID:
ABY99123
UniProt:
B0KHP1
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All DBs
Position
3619145..3620482
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AA seq
445 aa
AA seq
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MSSRNPVLWPEGLFVKPQHFQQAARASEAALHQRLASLNAAFYGFSEIQLNDEYLSLGKI
AITRARGVMPDGTVFDIPADLPPPPPLEIGDDACKDSEVYLCLPLRTDGGREVSWPDNAA
NFRYTAQAQEIKDTHTADGDLVNVDLAVPNLQLKRKAQDSSAYTRLALARILERRPDGSL
QLDEAFYPTSVSVRAIPALQRFLDEITNTLRERARGLATRIGASGQSGIADIRDFNLLQA
MNRWWPCFQHLARQAQTHPEQLYLSMSQACGEFVTFTDENRLPQEYPAYHHTALHTSFKP
LENTLRRSLSTVLRPRAVSLPLEGEAFGVMTTTLEDRRLIDEADFILAVRADLPPQALRQ
MFIQKAKITSLESLIDLVPLQLPGIPLRPLPVAPRDLPFHAGFSYFELDRRDPTWACMAK
ANGFGIHIAGEFPGLELQFWAIRSE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgcaaccccgtcctttggcccgaaggcctgttcgtaaaaccacagcatttc
caacaggcggccagggccagtgaagcagccctgcaccagcgcctcgccagcctcaatgca
gcgttctatggcttcagcgaaatacagttgaacgacgagtacctgagccttggcaagata
gccatcactcgggcgcgaggcgtcatgccggacggcacggtattcgacattcccgccgac
ctgccaccaccaccgccactggaaatcggcgacgacgcttgcaaggacagcgaggtgtat
ctgtgcctgccgctgcgaaccgatggggggcgcgaagtgagctggcccgacaatgctgct
aacttccgctataccgcccaggcacaggaaatcaaggatacccacaccgccgatggcgac
ctggtaaacgtagaccttgccgtgcccaacctgcagctcaagcgcaaggcccaggacagt
agcgcctacactcgcctggcactggcacgcatcctggaacggcgccccgatggcagcctg
cagctggacgaagcgttctaccctaccagcgtgtcagtgcgggcgataccagcactgcag
cggttcctggacgaaatcaccaacacactgcgcgagcgcgcgcggggacttgccacacgc
attggcgcatcgggccaatccggtatcgccgatatccgcgacttcaacctgctgcaggcc
atgaaccgttggtggccatgctttcagcacctggccaggcaagcgcaaacgcaccccgag
cagctgtacctgagcatgagccaggcctgcggcgaattcgtcactttcaccgacgaaaac
agactgccgcaggagtacccggcgtatcaccacactgcactgcacacctctttcaaaccg
ctggaaaacaccttgcgccgatccctgagcacggtcctgcggccacgcgccgtgtcgcta
ccgttggagggcgaagcattcggcgtgatgacaaccacgctagaggaccgtcgcctaatc
gacgaagccgacttcatcctcgccgtgcgcgccgacctgccgccacaggctttgcgccag
atgttcatccagaaagccaagattacttcacttgagtcattgatcgacctggtgccgcta
caactgccgggcatccctttgcgaccactgccggtggccccgcgtgacctgcccttccat
gcaggtttcagctacttcgagttggaccggcgtgacccgacctgggcatgcatggccaag
gcaaatggcttcggtatccacatcgcgggcgagttcccaggacttgagctgcagttctgg
gcgatcaggagtgagtga
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