Pseudomonas putida GB-1: PputGB1_3247
Help
Entry
PputGB1_3247 CDS
T00650
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppg03000
]
PputGB1_3247
Transcription factors [BR:
ppg03000
]
Prokaryotic type
Helix-turn-helix
Other families
PputGB1_3247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
HTH_30
AAA_3
AAA_5
Mg_chelatase
AAA
HTH_28
PAS_4
AAA_16
HTH_1
PAS_8
T2SSE
HTH_29
AAA_14
HTH_7
HTH_23
AAA_18
AAA_2
HTH_22
nSTAND3
RWP-RK
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABY99139
UniProt:
B0KII4
LinkDB
All DBs
Position
3639666..3641456
Genome browser
AA seq
596 aa
AA seq
DB search
MDRLQLQLHSARQQFAEGLPLPAGLLPEPIERSWERSRAAGLSPWQPRLAHGQLDVLPLT
EADSQLAACVQPELERLWELIGDSHWMLFCVNPDNRIVQTRKPSGIDGPLSALHTGRRVS
EVDVGTTAPACTLMDGLPAIVAGNQHYLQEFAQFFCVSVPLRGVNGELLGALDLTGIGTR
NAGTMLERLKHAALATENNFFHGLPGCRILELQHDPRLLGSPLQALLAVHDDGTVYAANR
AAQQLLGVPSYRPEGLTLEQLFDRPGHNGLDGSPQLLALADGSRLYGRLLAQPAAKPRPL
RASHTALGSDRRVNARFADACKAVAGNLPVLITGPTGSGKEVFAKALHEHCCPQAPFIAI
NCAALPESLIEAELFGYTEGSFTGARKGGAVGLLESAGDGILLLDEIGDMPLALQSRLLR
ALQERQITRVGSTSSVALKAHVVAATHKDLASLVSSGGFREDLFYRLDGLRVALPALEQR
LDKAQLIDNFFQRPGFPPLAAEARRQLQAYHWPGNLRQLDNVARLVGVLAAGEPCIDLQH
LPDDLQGQAHVTSCNLADATQEVIERVLLAHAGNVSAAAKELGISRTTLYKRLGKQ
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcctacaactccagttgcacagcgcccgccagcagttcgccgaaggcctgccg
ttgcccgccgggctgctgccggaacctatcgagcgctcgtgggagcgttccagggccgcc
gggctcagcccgtggcaaccgcgcctggcacacgggcagctggatgtgctgccactgacc
gaggccgacagccaactggctgcctgcgtgcaaccagagctggaacggttatgggagctg
attggcgattcgcactggatgctgttttgcgtcaacccggataaccgcattgtccagacc
cgcaagccatcaggcatcgacggcccgttgtcggccctgcacaccgggcgccgggtcagc
gaggtcgacgtcggcaccactgccccggcctgcacgctgatggacggcctgccggcgatc
gttgccggcaaccagcattacctgcaggagtttgcccagtttttctgcgtcagcgtgcca
ttgcgcggggtcaatggcgagctgctcggggcgctggacctgaccggtatcggcacacgc
aatgccgggaccatgctcgaacgcctcaaacatgcggcgctggcgactgaaaacaatttc
ttccacggcctgccgggctgccgcatcctggagctgcaacacgacccaaggctgctcggc
tcgccactgcaggcgctgctggccgtgcacgacgatggcacggtgtacgcagccaaccgc
gccgcacagcagttgctgggcgtgcccagctaccgccctgaagggctgacgctggagcaa
ctgttcgaccgccctggccacaacggcctggatggctcgccgcagctgctggccttggcc
gacggctcacgcctgtatggccggctattggcgcagcctgccgccaagccacggccactg
cgggccagccacacggcgctgggcagcgaccggcgggtcaacgcccgcttcgcagatgcc
tgcaaggccgtggctggaaacctgccggtgctgatcaccgggccgaccggttctggtaaa
gaagtgttcgccaaggcgctgcacgaacactgctgcccacaggccccgttcattgcaatc
aactgcgcagccctgcccgagagcctcatcgaagctgaactgttcggctacaccgaaggc
agcttcactggcgctcgcaaaggcggcgccgtgggcctgctggagtccgccggcgacggc
atcttgctgctggacgaaatcggtgacatgccgttggccctgcaaagccggctgctgcgt
gccttgcaggagcggcagatcacccgtgttggcagcaccagcagcgtggcgctgaaggcc
cacgttgtcgccgccacccacaaggacctcgccagcctggtgagcagcggcggctttcgc
gaggacctgttctaccgcctggacggcctgcgcgtggccctgcctgccctggaacagcgc
ctggacaaggcgcaactgatcgacaattttttccagcgcccaggcttcccgccgttggcg
gcagaggccaggcgccaattgcaggcctaccactggccgggcaacctgcggcaactggac
aacgtggcgcgcctggtcggggtgctggccgctggcgaaccgtgcatcgacctgcagcac
cttcccgacgacctgcaaggccaggcgcacgtgacgtcgtgcaaccttgccgacgctacc
caggaagtgatcgaacgcgtcctgctggcccatgccggtaacgtcagcgccgccgccaag
gaactcggtatctcgcgcactaccttgtacaagcgcctgggcaagcagtag
DBGET
integrated database retrieval system
