Pseudomonas putida GB-1: PputGB1_3634
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Entry
PputGB1_3634 CDS
T00650
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppg03016
]
PputGB1_3634
Enzymes [BR:
ppg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PputGB1_3634
Transfer RNA biogenesis [BR:
ppg03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PputGB1_3634
Prokaryotic type
PputGB1_3634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
NAD_binding_10
DUF6500
Motif
Other DBs
NCBI-ProteinID:
ABY99525
UniProt:
B0KMS1
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All DBs
Position
4036235..4037194
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AA seq
319 aa
AA seq
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MDLLFLGTSAGVPTKARNVSATAVIETNGSHWYLVDCGEGTQHRLLHTPLSIRDLRAIFI
THVHGDHCFGLPGLLASAGMSGRTQPLELILPVALHDWVRQGLVASDTFLPFELRLLAVE
ELAEWRNEALQVTTVQLSHRVPSVGFVFTELNPEPRLDTQRLQAEGIPRGPLWGELAKGL
TVQHDGQLLDGHDYLRPSRPPRRVIVCGDNDNPELLADVAKGADVLVHEATFTQAVVERT
GVTFGHSTAAAVARFAEGAGVRNLVLTHFSARYQSDPRRSPNIDNVRDEALAHYSGQLTL
AQDLQRYHLGRDGCLEPVG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacctgctgttcctcggcacctccgccggggtgccgaccaaggcacgcaatgtcagc
gccacggccgtgatcgaaaccaacggcagccactggtacctggtcgattgcggcgaaggc
acccagcaccggctgttgcatacgccactgtcgatccgcgacctgcgtgcaatcttcatc
acccacgtgcatggcgaccattgcttcggcctgcccggcctgctggccagcgctggcatg
agcgggcgcacccagccgctggagctgattttgcccgtcgcgctgcacgactgggtacgc
cagggcctggtggccagcgacacgttcctgccattcgaactgcgcttgttggccgtggag
gaactggccgaatggcgcaacgaggccctgcaggtgaccaccgtgcaactgtcgcaccgg
gtgcccagcgtgggcttcgtgttcactgaactcaaccccgaaccccgcctggacacccag
cggctgcaagccgaaggtatcccccgtggcccgctgtggggcgaactggccaaaggcctg
acggtgcagcacgacgggcagttgctggacggtcacgactacctgcgcccgtcacgcccg
ccacggcgggtgatcgtgtgcggggacaacgacaaccccgagctgctggccgacgtcgcc
aagggtgcggacgtactggtgcatgaggccacgttcacccaggcggtggtcgaacgcacc
ggggtcacgttcggccacagcaccgccgctgcagtggcgcgctttgccgagggcgctggt
gtgcgcaacctggtactgacgcatttcagcgcccgttaccaaagcgacccaaggcgtagc
cccaacatcgacaacgtgcgcgacgaggccctcgcccattacagcgggcagctgaccctg
gcgcaggacctgcagcgctatcaccttggccgtgatggctgtcttgagccggtcggatga
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