Pseudomonas putida GB-1: PputGB1_3834
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Entry
PputGB1_3834 CDS
T00650
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg03030
DNA replication
ppg03430
Mismatch repair
ppg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PputGB1_3834
03430 Mismatch repair
PputGB1_3834
03440 Homologous recombination
PputGB1_3834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppg03032
]
PputGB1_3834
03400 DNA repair and recombination proteins [BR:
ppg03400
]
PputGB1_3834
Enzymes [BR:
ppg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PputGB1_3834
DNA replication proteins [BR:
ppg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PputGB1_3834
DNA repair and recombination proteins [BR:
ppg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PputGB1_3834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
ResIII
AAA_14
AAA_30
TIP49
AAA_16
PIF1
AAA_18
AAA_19
AAA_2
TsaE
nSTAND3
AAA_7
HasA
Rad17
SKI
zf-CXXC
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ABY99724
UniProt:
B0KPW9
LinkDB
All DBs
Position
complement(4271940..4274003)
Genome browser
AA seq
687 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQAHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSTHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMSP
ERVVEHLSHVLSAENVPFEPDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGSLDHGQVYGVLQALLEGDARALLEAVRNLAEQGPDWSGVLAEMLNVLHRVAIAQALPE
AVDNGQGDRERVLALASALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTDDAPKPVLKPVGISQATADPAAPVAALAPAEPTPPVAFVPPEPAVAATQVEVPAPAT
ADHEPEVEPDVELKAEIEAISVPEPVAEVVDLPWEEPAAAPAPVAAAPAPVPEPVAPAAS
PKAAPVLDEPPFDPSAYAAVGMDRDDEPPLDEDYYGGESDPVGFSYLDELAEHVQEEAPK
PVAQPLPAAKPATGLALQWLELFPQLPVSGMTGNIAANCTLIAAEGDDWLLHLDPGQGAL
FNATQQRRLNEALNQHLGRTLNLRIELILPEQETPAQAAARKRAERQQDAVTSIEQDPLI
QQMIKLFGAKVRQDTIEPVEALVDQGQ
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
caggcccatgtgctgaaggccttgatcaatgccttggacaaccagcgcctgcaccacgcc
tacctgtttaccggtacccggggcgtgggcaagaccaccatcgcccgtatcatcgccaag
tgcctgaactgcgaaaccggcattacctccaccccgtgcggcacctgttcggtgtgcagg
gagatcgacgaaggccgttttgtcgacctgatcgagatcgacgccgccagccgcaccaag
gtcgaggacacccgtgaactgctcgataacgtgcagtacgcccccagccgtgggcgcttc
aaggtctacttgatcgacgaagtgcacatgctctcgacccactcgttcaacgccttgctc
aaaacgctggaagagccgccgccctacgtcaagttcatccttgccaccaccgacccgcag
aagctgccggccaccatcctgtcgcgctgcctgcagttctcgttgaagaacatgagcccg
gagcgggtggtcgagcacctgagccacgtgctgtccgccgaaaacgtaccgttcgagccg
gatgccctgtggctgctgggccgtgcggctgatggctcaatgcgtgacgccatgagcttg
accgatcaggccatcgcctttggcgaaggcaaggtgctggctgccgatgtacgcgccatg
ttgggcagcctcgaccatggccaggtctatggtgtgctgcaggcgctgcttgaaggtgac
gccagggcgttgctggaggccgtgcgcaacctggccgagcaggggccggactggtcgggc
gtgctggccgaaatgctcaatgtgctgcaccgtgtggccatcgcccaggcgctgccggaa
gcggtggacaacggccagggcgatcgtgagcgtgtactggcgctggcttcggcgctgccg
gccgaagacgtgcaattctattaccagatgggcctgatcggccgccgcgatctgccgttg
gcgccggacccgcgtggtgggttcgaaatggtcctgctgcgtatgctggcgttccgcccg
gccgatacggacgacgcaccgaaaccggtgctaaagccagtggggatcagccaggccaca
gctgatcccgcagcgccggtggcagccttggcgccggccgagcccacaccgcctgtcgcg
ttcgtgccgcctgagcctgcggtagccgcgacgcaggtggaagtgcctgcaccggcgaca
gccgaccatgagccggaggtcgagccagacgttgagctgaaggccgagatcgaggccatt
tccgtgcccgagcctgttgccgaggtggtcgacctgccatgggaagaaccggcagccgca
cctgctccggtagcggctgcacctgcacctgtgcctgaaccggttgccccggcggcgtcc
ccgaaggctgccccggtactcgacgagccgcctttcgatccgtctgcctatgctgccgtg
ggcatggatcgcgacgatgagccgccgctggatgaagactactacggcggcgaaagcgac
ccagtcggtttcagctacctggacgaactggccgagcacgttcaggaagaagcgcccaag
cctgtagctcaaccgctgccagcagccaagccggccacgggcctggccctgcaatggctg
gaattattcccacagttgcctgtgtccggtatgacaggcaacatcgcggcaaactgtacg
ctgattgccgccgagggtgacgattggctgctgcacctggacccgggccagggcgcgctg
ttcaatgcaacccagcagcggcgcttgaacgaggcgcttaaccagcacctggggcgtacg
cttaacctgcgcatcgagctgatcctgcccgagcaggaaaccccggcccaggccgcagcg
cgcaagcgtgccgagcgccagcaggacgcggtcacttcgatcgagcaggatccgttgatc
cagcagatgatcaagttgttcggcgccaaggtacggcaggatactattgagcctgtagaa
gccctggtcgatcagggccagtaa
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