Pseudomonas putida GB-1: PputGB1_3932
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Entry
PputGB1_3932 CDS
T00650
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg02020
Two-component system
ppg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PputGB1_3932
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PputGB1_3932
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppg02022
]
PputGB1_3932
02035 Bacterial motility proteins [BR:
ppg02035
]
PputGB1_3932
Two-component system [BR:
ppg02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
PputGB1_3932
Bacterial motility proteins [BR:
ppg02035
]
Flagellar system
Flagellar assembly proteins
Others
PputGB1_3932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
MCM
AAA_16
FleQ
AAA
HTH_20
HTH_30
MerR
AAA_2
AAA_3
AAA_19
Mg_chelatase
DUF2249
HTH_24
HTH_28
HTH_23
HTH_11
nSTAND3
Sigma70_r4_2
AAA_22
AAA_7
HTH_1
AAA_14
ATPase
HTH_17
HTH_Mga
PDE8A_N
Myosin_head
TIP49
Motif
Other DBs
NCBI-ProteinID:
ABY99822
UniProt:
B0KQZ6
LinkDB
All DBs
Position
complement(4375679..4377034)
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AA seq
451 aa
AA seq
DB search
MAVKVLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVRGDAFSLVVSDVNMPGMD
GHQLLSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLSLVQRHAAG
RVTGEEGPVACEPASRQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSPRATQPF
VAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMPMALQAKL
LRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRPLR
ERPGDILQLAERLLARHVAKMKHAPVRLSPQARACLQAYAWPGNVRELDNALQRALILQQ
GGVIEAADFCLAGAIPLSAGTEPSLEVAAEAGGLGDDMRRHEYQMIIDTLRAERGRRKEA
AERLGISPRTLRYKLAQMRDAGFDVEASLFG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaaggtgctgctggtcgaggacgaccgcgtattgcgccaggcgctgggcgat
accttggaaatcggcggtttcgcctaccaggccgtgggcagtgctgaagaggcgctggag
gctgtgcggggtgacgccttcagcctggtggtcagtgatgtgaacatgcctggcatggat
gggcatcagttgctgagccagctgcgccgccagcaaccacagctgccggtgttgttgatg
acggcgcacgctgccgtcgagcgtgcggtcgaggccatgcgccagggcgccgccgattac
ctggtcaagccgttcgagcccaaggcgctgttgagtcttgtgcagcgccatgccgccggg
cgagtgaccggcgaagaggggccggtggcctgcgagcctgccagccgccaactgctggaa
ctggccgcacgggttgcgcgcagtgactcgaccgtgctgatttccggcgagtccggtacc
ggcaaggaggtgctggcgcgttacattcaccagcagtcgccacgtgccacgcaacccttc
gtcgcgatcaactgcgcggcgatccccgacaacatgctcgaagccaccctgttcggccac
gagaagggggcgttcaccggcgctatcgccgcccaggccggcaagttcgagcaggccgaa
ggcggcaccctgctgctcgacgaaatctcggaaatgcccatggccttgcaggccaagctg
ctgcgcgtgctgcaggaacgcgaagtggagcgggtgggcggccgcaagccgatcagcctc
gacattcgtgtgctggccaccaccaaccgtgacctggcgggggaagtggcagctgggcgc
tttcgcgaagacctgtactaccgcttgtcggtgttcccgctggcctggcgcccgctacgt
gagcgcccaggcgatatcctgcagctggccgagcgcttgctggcgcggcatgtggccaag
atgaagcatgccccggtgcgcctatcgccgcaggcacgcgcttgcctgcaggcctatgcc
tggccaggcaatgtgcgcgaactggacaacgcgttgcagcgggcgctgatcctgcaacag
ggtggcgtgatcgaggcggcggatttttgtctggcaggcgccattccgttgtcggctggc
acggagccatcgcttgaggtggccgctgaggccggcggcctgggtgatgacatgcgccgt
cacgagtaccagatgatcatcgacaccctgcgcgccgagcgcggccgccgcaaagaggcg
gccgaacgcctggggatcagcccgcgtaccttgcgctataagctggcgcagatgcgtgat
gccgggtttgacgtcgaggccagccttttcggttga
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