Pseudomonas putida GB-1: PputGB1_4000
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Entry
PputGB1_4000 CDS
T00650
Name
(GenBank) transcriptional regulator, LysR family
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppg03000
]
PputGB1_4000
Transcription factors [BR:
ppg03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PputGB1_4000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABY99890
UniProt:
B0KRW7
LinkDB
All DBs
Position
4452002..4452886
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AA seq
294 aa
AA seq
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MNYRHLTPSMSLLLAFEAAARHESYTRAAAELSLTQSAVSRQVQALEQQLGLTLFRREGR
QVQLTDVGRLYQRELSEALGRIRSATLQALAYQSGVGTLRLATLPTFGSKWLLPRLHAFY
SAHPGMLVHIHSRIEAINFDTSEIDAAIGVASHDLPGLICHRLHAEELVVILPPEAGAAS
QNWSPTRISEEVLLNVANNPHAWGEWFSHHGLPHRSMRLGPSFELTSHLIQAVRAGIGIG
LVPRILVEEELAKGELYSPGVAFASQRSYYLIYPPRNEALPSLRAFRSWLLEQI
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaattaccgccacctgaccccatccatgtcgttgctgctggctttcgaggccgccgcc
cggcatgaaagctacacccgcgccgctgccgaactgtcactgacccagagcgcggtcagc
cgccaggtgcaggcgctggagcagcagctgggcctgaccttgttccgccgtgaggggcgc
caagtacagctgaccgatgtcggccgcctgtaccagcgtgagctcagcgaggcgctgggg
cgcatccgcagcgccaccctgcaggcgctggcctaccagtcgggggtgggcaccttgcgc
ctggccaccctgcctaccttcggttcgaaatggctattgccgaggctgcatgcgttctac
agtgcccatccgggcatgctggtacacattcattcacgcatcgaagccatcaacttcgac
accagcgaaatcgacgctgccatcggcgtggccagccacgacctgccggggctgatctgc
catcgcctgcatgccgaggaactggtggtgatcctgccgcccgaggctggcgcggccagc
cagaactggagcccgacaaggatcagtgaagaggtgttgttgaatgtggccaacaaccca
cacgcctggggcgagtggttttcgcaccatggcctgccgcaccggtcgatgcgcctgggc
ccgagtttcgaactgacctcgcacctgatccaggcggtgcgcgccgggattggtatcggc
ctggtgccgcgcattctggtggaggaagagttggccaaaggtgagctgtacagcccgggg
gtggcgtttgccagccagcgcagttattacctgatctacccgcccaggaatgaggccttg
ccttcgctacgggcattcaggagctggttgctggagcaaatctga
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