Pseudomonas putida GB-1: PputGB1_4272
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Entry
PputGB1_4272 CDS
T00650
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppg03021
]
PputGB1_4272
Transcription machinery [BR:
ppg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PputGB1_4272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ABZ00161
UniProt:
B0KU95
LinkDB
All DBs
Position
4780990..4783836
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFEGWKLTVREVEDIDGLMVYHGLDGQNQPRTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHTSKQMQSALWGLGGCRAQPIAHQLHIAREVADRSAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEDQASTEYSLVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLDE
GRLSPKAHATIQGFLGAEGEALLAAVNDGDTQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLATPEQYRDLPAGEHAELYPEVAFQAQGEAADDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPASVFHEGMSILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHIPYLQDSP
QERLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLPLLEGGESKAWDALVADARGERERLE
AELHTGRDRLLELNSGGAGEGQALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRAQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLFVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLASRVAF
ETLNDQLESVPRASANKFVQAQRDVLAKRISGGEEKILPIHVERVAEAQRRLAAEADEEL
ARLVALQAVNPSVRDSEIDALRKQREDGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagcagagctcggc
ctgggtaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccactggc
gacacccgccagtattccctgcgcaatgcgccgctgacccgcgtgcgcttctcgccaggt
gaccagatcacccacttcgaaggctggaagctgaccgtccgcgaggtcgaggacatcgac
gggttgatggtctaccacggcctggacgggcaaaaccagccgcgtaccctgccagaaact
cagctgtcgaacttcatccagttccgcctggccagcgaccgcctgttcgccgggcagatc
gacccgctgtcgtggttcagcctgcgctacaacaccctgcagcacaccagcaaacagatg
cagtcggcgctgtggggcctgggcggctgccgcgcacaacccatcgcccaccagttgcac
atcgcccgtgaagtcgccgaccgcagcgctccgcgcgttttgctggccgacgaagtgggc
ctgggcaaaaccatcgaggccggcctggtcattcaccgccagctgctgtctggccgtgcc
aaccgcgtactgatcctggtgccagaaaacctccagcaccagtggctggtggaaatgcgc
cggcgcttcaaccttcaggtagccctgttcgacgccgaacgcttcatcgaaagcgacgcc
agcaacccgttcgaagacgcccagctggcgctggttgcgttggagtggctggtcgacgac
gaaaaagcccaggacgcgctgtttgccgctggctgggacctgatggtcgtcgacgaagct
caccacctggtctggcacgaagaccaggccagcaccgaatacagcctggtcgagcaactg
gcccaggtgatcccgggcgtgctgctgctcaccgccacccccgagcagcttggccaggac
agccacttcgcccgcctgcgcctgctcgaccctaaccgtttccacgacctggcggccttc
cgcgccgagagcgagcactatcgcccggtcgccgaggcggtacaggaactgctcgacgaa
ggccgcctgtcgcccaaggcccacgccaccatccagggcttcctgggtgccgaaggcgaa
gccctgctggccgcggtcaacgatggcgacacccaggccagcgcgcgtctgatccgcgag
ctgctggatcgccacggcaccggccgcgtgctgttccgtaacacccgtgcggcgattcag
ggcttccccgagcgccagttgcacccctacccgctggccacacccgagcagtaccgcgac
ctgccagccggcgagcacgccgagctgtacccggaagtcgccttccaagcccaaggggaa
gcggccgacgacgagcgctggtggcgtttcgacccgcgcgtggattggctgatcgacacc
ctgaagatgctcaagcgcaccaaggtgctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgctccggtatcccggcctcggtgttccacgaaggc
atgagcatcctcgagcgcgaccgcgccgctgcctacttcgccgatgaagagtttggcgcc
caggtgctgatctgctccgaaatcggcagcgaaggccgcaacttccagttcgctcaccac
ctggtgatgttcgacctgccggcgcaccccgacctgctcgaacagcgcattggccgcctt
gaccggatcggccagaagcacaccatccagttgcacatcccgtatctgcaggacagcccg
caagagcgtctgttccagtggtaccacgaaggtctcaacgccttcctcaacacctgcccc
accggcaacgccctgcagcaccagttcggcccacgcctgctgccgctgctcgagggtggc
gaaagcaaggcctgggatgccctggtggccgatgcccgcggcgagcgcgagcgcctggaa
gccgaactgcacacagggcgtgaccgtctgctggagctcaactccggcggtgccggcgaa
ggccaggcgcttgtcgaggacattctcgaacaggacgaccaattcgccctgccgatctac
atggaaaccctgttcgacgccttcggcatcgacagtgaagaccattccgagaacgcactg
atcctcaaaccaagcgagaagatgctcgatgccagcttcccgctgggcgacgacgaaggt
gtgaccattacctacgaccgcgcccaggcgctgtcgcgcgaggatatgcagttccttacc
tgggaacaccctatggtgcagggcggcatggacctggtgctgtccggctcgatgggcaac
accgccgtggcgctgatcaagaacaaggcgctcaaaccgggcaccgtgctgctggaattg
ctgttcgtcagtgaagtggtggcaccgcgcagcctgcaactgggccgctacctgccgccg
gcggcattgcgctgcctgctcgacgccaacggcaacgacctggcatcgcgcgtggccttc
gaaaccctcaacgaccagctcgaaagcgtgccacgcgccagcgccaacaagttcgtccag
gcccaacgcgatgtactggccaagcgcatcagtggcggcgaggagaagatcctgcccatc
cacgtcgagcgcgttgccgaagcccagcgccgtctggcggcggaggcagacgaagagttg
gcccgcctcgtagccctgcaagcggtcaacccaagtgtgcgtgacagcgaaatcgacgcc
ctgcgcaagcaacgcgaagatggcctggcaatgctggagaaagccgccctgcgcctggaa
gccattcgcgtgctggtggctggctga
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integrated database retrieval system
