Pseudomonas putida GB-1: PputGB1_4372
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Entry
PputGB1_4372 CDS
T00650
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PputGB1_4372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppg03400
]
PputGB1_4372
DNA repair and recombination proteins [BR:
ppg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PputGB1_4372
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PputGB1_4372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ABZ00261
UniProt:
B0KV25
LinkDB
All DBs
Position
complement(4896756..4897439)
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AA seq
227 aa
AA seq
DB search
MDQPTPQPAYVLHSRAYKETSALVDFFTPQGRVRAVLRRARSKGGSLVRPFVPLEVELRG
RGELKNVGGMDSAGTAAWLHGDALFSGLYLNELLMRLLPAEAPFPTLFEHYTLTLQALGA
GRPLEPLLRSFEWRLLDELGYAFSLQQDVNDQPVAADGLYRLRVDAGLERVELAQPGLFR
GTELLALAEANWEAPGALLAAKRLMRQALAVHLGAKPLVSRELFRKR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggaccaacccaccccccagccagcctatgtgctgcacagccgagcctacaaggaaacc
agcgcgctggtggacttcttcaccccccagggccgcgtgcgcgccgtgttgcgccgcgcg
cgcagcaaagggggcagcctggtgcggccgttcgtgccgctggaggtggagctgcgtgga
cgtggtgagctgaagaatgtcgggggtatggacagcgctggtaccgccgcctggctgcac
ggcgatgctctgttcagcgggttgtacctcaacgaattgctgatgcgcctgctgcccgcc
gaggcgccgttcccgacccttttcgagcactacaccttgaccttgcaggccttgggcgcc
gggcgcccgctggagccgctgctgcgctctttcgaatggcggctgctggacgagctcggt
tatgcgttttccttgcaacaggacgttaatgaccaacctgtcgctgccgacggcctgtac
cgtttgcgcgtggatgccggcttggagcgggtcgagttggcacaacccggcttgttccgt
ggtaccgaactgctggctttggccgaagccaactgggaggccccaggtgccttgctggct
gccaagcgcctgatgcgccaggcactggcggttcacctgggggcaaaaccgctggtcagc
cgggaactgtttcgcaagcgctga
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