Pseudomonas putida GB-1: PputGB1_4397
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Entry
PputGB1_4397 CDS
T00650
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PputGB1_4397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppg03400
]
PputGB1_4397
Enzymes [BR:
ppg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PputGB1_4397
DNA repair and recombination proteins [BR:
ppg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PputGB1_4397
Prokaryotic type
PputGB1_4397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABZ00286
UniProt:
B0KV50
LinkDB
All DBs
Position
complement(4922657..4923349)
Genome browser
AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPSWKAALRGEFDQPYMHQLREFLRGEYAAGKEIYPPGPLIFNALNSTPLD
QVKVVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIASHGYLQSWA
EQGVLLLNTTMTVERANAASHAKKGWEFFTDRVIQVVSEQCPNVVFLLWGAHAQSKQKLI
DGTKHLVLKSVHPSPLSAYRGFLGCGHFSRTNSFLEQRGMAPINWALPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgatcgcatcaaactcgaacccagctggaaggccgcattgcgcggcgaa
ttcgaccaaccctacatgcatcagctgcgcgagttcttgcggggtgagtatgctgccggc
aaggagatctacccaccagggccgctgatcttcaacgcgctcaactcgacgccgctggac
caggtgaaggtggtgatcctcggtcaggacccttaccacgggccgggccaggcacatggc
ttgtgcttctcggtgcaaccgggcgtggccacgccaccgtcgctggtcaatatctacaaa
gagctgcagcgcgacctgaacatcccgattgccagccacggctacctgcagagctgggct
gagcagggcgtgctgctgctcaacaccaccatgaccgtggagcgtgccaatgcggcatcg
catgccaagaaggggtgggagttcttcaccgatcgcgtcattcaggtggtcagcgagcag
tgcccgaatgtcgtgttcctgctgtggggcgcgcatgcgcagagcaagcagaagctgatc
gacgggaccaagcacctggtgctgaagtcggtgcatccttcgccgttgtcggcttaccgt
gggttcctcggctgtgggcattttagccggaccaacagcttcctcgaacaacggggcatg
gcgccgatcaactgggcattgccaccgctgtga
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integrated database retrieval system
