Pseudomonas putida GB-1: PputGB1_4638
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Entry
PputGB1_4638 CDS
T00650
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppg03400
]
PputGB1_4638
DNA repair and recombination proteins [BR:
ppg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PputGB1_4638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
AAA_16
DnaB_C
GvpD_P-loop
AAA_22
AAA
Rad51
RecA_N
SLFN-g3_helicase
nSTAND_NTPase5
nSTAND3
AAA_24
NTPase_1
AAA_14
MCM
zf-C2H2_6
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ABZ00525
UniProt:
B0KHQ4
LinkDB
All DBs
Position
complement(5175770..5177140)
Genome browser
AA seq
456 aa
AA seq
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MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPSSGRAGWTGQQAQI
KTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAVGM
PALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIETIIATARVEKPRVMVIDSIQTIF
TEQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTVLYF
EGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVPGSVVMAT
WEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVV
GGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRPVPSGQERLKEAAKHG
FKRAIVPKGNAPKEPPAGLQVIAVTRLEQALDALFE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcttgtatggctgcaccgagtgcggcgcgaccttccccaaatgg
gccggccagtgcggcgaatgcggggcctggaacacgctggtcgaaaccatgatcgaaagc
ggcggcgccgcagcgcccagcagcggccgcgcgggttggaccgggcagcaggcacagatc
aagaccttggccgaagtcagcgtcgaagaaatcccgcgcttcaccaccagcagtactgaa
ctggaccgcgtactgggcggtggcctggtggatggctctgtggtgctgattggtggtgac
cccggtatcggcaagtcgaccattttgttgcaaacgttgtgcaacatcgccgtcggcatg
ccggcgctgtatgtcaccggtgaggagtcgcagcaacaggttgccatgcgctcacggcgg
ctgggcctgccccaggaccagctcaaggtaatgaccgaaacctgcatcgagaccatcatc
gctacggcacgcgtcgagaaacccagggtgatggtgatcgactcgatccagacgattttc
accgagcagctgcaatcggcccccggcggcgtggcccaggtgcgcgaaagcacggcgttg
ctggtgcgttacgccaagcagagcggcacggcgatcttcctggtcggccacgtgaccaag
gaaggctcgctggccggcccgcgggtactggagcacatggtcgataccgtgctgtatttc
gaaggcgagtccgatggccgtctgcgcttgttacgggcggtgaagaaccgttttggcgcg
gtcaacgagctgggcgtgttcggcatgaccgaccgtggtcttaaagaagtgtccaacccg
tcggcgatcttcctcaaccgtacccaggaagaagtgccaggcagcgtggtaatggctacc
tgggagggcacccggccaatgctggttgaagtgcaggcgctggtcgacgatagccatctg
gccaatccgcggcgggtaaccctgggcctggaccagaaccgcctggccatgttgctggcg
gtgctgcaccgtcatggcggtattcctacccatgaccaggacgtgttcctcaacgtggtg
ggtggggtgaaggtgctggaaacggcttcggacctggcgctgctggcggcggtcatgtcc
agcctgcgcaatcggccgctggcccatggtctgctggtgtttggcgagatcggcctgtcg
ggtgaggtgcggccggtgcccagtggccaggagcgcttgaaggaagcggccaagcacggc
ttcaagcgggccatcgtgcccaagggcaatgcgccgaaagagccaccggcggggttgcag
gtgattgccgtgacccggctggagcaagccctggatgcattgttcgagtaa
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