Pseudomonas putida GB-1: PputGB1_4713
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Entry
PputGB1_4713 CDS
T00650
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppg03021
]
PputGB1_4713
03009 Ribosome biogenesis [BR:
ppg03009
]
PputGB1_4713
Transcription machinery [BR:
ppg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PputGB1_4713
Ribosome biogenesis [BR:
ppg03009
]
Prokaryotic type
rRNA transcription factors
PputGB1_4713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_KhpA-B
DUF507
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
ABZ00600
UniProt:
B0KHX9
LinkDB
All DBs
Position
complement(5267239..5268720)
Genome browser
AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPPGVIFEALEVALATATKKRFEDEVDLRVEINRHTGSYETFR
RWTVVDEADLDDPAIETWLDKIKDTHPEAKVGDVIEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERVGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIIPRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPQMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVAEDNLAQAIGRGGQNVRLASQLTGWTLNVMTEKDIQAKQQAETGDILRN
FIDELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDIVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAAELAVRGVVNREDLAEQSIDDLLDIDGIDEERA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgaatcggtatccaacgaaaaaggtgtaccgccc
ggcgtcattttcgaagcgctggaagtggccctggccactgcaaccaaaaaacgttttgaa
gacgaagtcgacctgcgtgtggaaatcaatcgccacaccggtagctacgagactttccgt
cgttggaccgtggtcgacgaagccgatcttgatgatccggcaatcgagacctggctggac
aagatcaaggacacccaccctgaagccaaggtcggtgacgtgatcgaggagaagatcgag
tccatcgagttcggtcgtatcgccgcccagaccgccaagcaggtcatcgtgcagaaggtc
cgtgaggccgagcgcgcccaggtggttgatgcctaccgcgaacgcgtgggcgagatcatc
tccggtaccgttaaaaaggttacccgcgacaacgtcatcgttgacctgggcaacaatgcc
gaggccttgctggctcgcgaagacatcattccgcgcgaaaccttccgtgttggcgtgcgc
ctgcgtgcgctgctcaaggaaattcgcactgaaaaccgtggcccacagctgattctgtcg
cgcaccgcgccgcagatgctgatcgagcttttccgcattgaagtgccggaaatcgccgag
ggcctcatcgaagtcatggctgcttcccgtgatccgggttcgcgagccaagatcgccgtc
cgctccaaggacaagcgtatcgacccgcaaggtgcctgcatcggcatgcgtggttcgcgc
gtccaggccgtatccggggagctgggtggtgagcgtgtggatatcgtcctgtgggacgat
aacccggcgcagttcgtcatcaacgccatgtcgccggccgaagtcgcggcgatcatcgtt
gatgaagatgcccatgccatggacatcgccgtcgccgaggacaacctggcccaggccatt
ggccgtggcggtcagaacgttcgcctggccagtcagttgaccggctggaccctgaacgtg
atgaccgagaaggacatccaggccaagcaacaggccgaaaccggtgacatcctgcgcaat
ttcatcgatgaactggaagtcgacgaggagctggcccaagtgctggtcgacgaaggcttc
accagcctcgaagaaattgcctacgtaccgttggaagaaatgctcaacatcgatggcttt
gacgaagatatcgtcaatgagctccgcgctcgagccaaggaccgtttgttgaccaaggcc
atcgctaccgaagaaaaactggcagacgcccacccggccgaagacctgctctccctcgag
ggcatggacaaggacctggcggctgaactggcggtgcgcggcgtggttaaccgcgaagac
ctggccgagcagtcgatcgacgatctgctcgacatcgacggcatcgacgaagagcgtgcc
ggcaagttgatcatggccgcccgagcccactggttcgagtaa
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