Pseudomonas putida GB-1: PputGB1_5158
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Entry
PputGB1_5158 CDS
T00650
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppg03021
]
PputGB1_5158
Transcription machinery [BR:
ppg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PputGB1_5158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
ABZ01043
UniProt:
B0KN62
LinkDB
All DBs
Position
complement(5768965..5769819)
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AA seq
284 aa
AA seq
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MTTSLQPAYALVPGANLEAYVHTVNSIPLLTVEQERDLGERLYYEQDVEAARQMVMAHLR
FVVHIARSYAGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLSGQD
MAFDPAAEADDDSAFQSPAHYLEDHRYDPAVQLEDADWSDNSASNLHEALQGLDERSRDI
LYQRWLAEEKATLHELADKYSVSAERIRQLEKNAMNKVKALIAV
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatcgttgcaacctgcctatgccctggtgcccggtgcaaacctggaagcctat
gtgcacacggtcaacagcatcccgctgctgacggtcgagcaggagcgtgatctgggcgag
cgtctctattatgagcaggatgtcgaggccgctcgtcaaatggtgatggcccacctgcgt
ttcgtcgtacatatcgcccgtagctatgccggctacgggttggcccaggccgacctgatc
caggaaggcaacgtcggcctgatgaaagccgtcaagcgcttcaacccggaaatgggcgtg
cgcctggtgtcgttcgccgtacactggatcaaggcagagattcacgagttcatcctgcgc
aactggcgcatcgtcaaggtggcgaccaccaaggcccaacgcaagttgttcttcaacctg
cgcagccagaagaagcgcctggcttggctgaacaacgacgaagtgcatcgcgtggcggaa
agccttggtgtcgagccgcgcgaagtgcgtgagatggaaagccgcctcagcggccaggac
atggccttcgacccagcagcggaagctgacgacgacagcgccttccagtcgccagcgcat
tacctggaagaccatcgttacgatcctgcggtgcagttggaggatgccgattggagtgat
aactccgccagcaacctgcacgaagcgctgcaaggtttggatgaacgtagccgcgatatt
ctctaccagcgctggttggcggaagagaaagccacgttgcatgagctggctgacaagtac
agcgtttcggctgagcggattcgccagctggagaagaatgcgatgaacaaggtcaaggca
ctgatcgcggtctga
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integrated database retrieval system
