Pseudomonas putida GB-1: PputGB1_5248
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Entry
PputGB1_5248 CDS
T00650
Name
(GenBank) transcriptional regulator, AsnC family
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppg03000
]
PputGB1_5248
Transcription factors [BR:
ppg03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PputGB1_5248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
NirdL-like_HTH
HTH_11
HTH_20
HTH_Crp_2
HTH_IclR
HTH_5
HTH_1
Sigma70_r4_2
MarR_2
HTH_23
Rrf2
MarR
DUF7343
Sigma70_r4
HTH_Tnp_ISL3
Phage_rep_O
LexA_DNA_bind
TrmB
HTH_39
Fe_dep_repress
Replic_Relax
HTH_27
Motif
Other DBs
NCBI-ProteinID:
ABZ01131
UniProt:
B0KP73
LinkDB
All DBs
Position
complement(5865472..5865942)
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AA seq
156 aa
AA seq
DB search
MHSQLDAYDRRILELLQEDASLSSAQIAERVGLSQSPCWRRIQRLKEEGVIRGQVTLLDR
KKVGLNTQIFAEVKLNAHGRSNFTEFTEAIRGFPEVLECYVLMGSVDFLLRIVTSDIEAY
ERFFFEKLSNVPGIQEVNSIVALSEIKSTTSLPLSR
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcacagccagctggacgcctacgatcgccgtattctcgaactactgcaagaggacgct
tcactgtccagtgcacagatcgccgagcgcgtggggctttcgcaatcgccgtgctggcgg
cgtattcagcggttgaaggaagagggggtaattcgcgggcaggtaaccttgctggaccgc
aagaaggtcggcctgaacacgcagatttttgccgaggtgaagctcaatgctcacgggcgt
tccaactttaccgaattcaccgaggcgatccgcgggtttccggaggtgctggagtgttat
gtgctaatggggtctgtggactttctgctgcgcatcgtcacatcggacatcgaagcttac
gagcgcttcttcttcgaaaagctgtcgaacgtgccgggcattcaggaagtgaactcgatt
gtggcgctgtcggagatcaagtccaccaccagcctgccactgtcgcggtga
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