Pseudomonas putida GB-1: PputGB1_5443
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Entry
PputGB1_5443 CDS
T00650
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppg03016
]
PputGB1_5443
Transfer RNA biogenesis [BR:
ppg03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PputGB1_5443
Prokaryotic type
Methyltransferases
PputGB1_5443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
Ras
RsgA_GTPase
ABC_tran
AAA_28
SRPRB
Roc
DUF4702
Golgin_A5
Motif
Other DBs
NCBI-ProteinID:
ABZ01325
UniProt:
B0KRC0
LinkDB
All DBs
Position
complement(6075052..6076422)
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AA seq
456 aa
AA seq
DB search
MNTVRETIAAIATAQGRGGVGIVRLSGPLAGKAGQLITGRTLTPRHAHYGPFRDDDGLVL
DEGIALFFPGPNSFTGEDVLELQGHGGPVVLDMLLQRCVQVGCRLARPGEFSERAFLNDK
LDLAQAEAIADLIEASSSQAARNALRSLQGEFSKRVHSLTEALIALRIYVEAAIDFPEEE
IDFLADGHVLSMLDAVRGELSTVQREAGQGALLRDGMTVVIAGRPNAGKSSLLNQLAGRE
AAIVTDIAGTTRDILREHIHIDGMPLHVVDTAGLRDTDDHVEKIGVERALKAIGEADRVL
LVVDSTAPEASDPFALWPEFLDQRPDPAKVTLIRNKADLSGEHVGLEQCDDGHVTITLSA
KGDDTGLQLLRDHLKACMGYEQTAESGFSARRRHLDALRQASEHLEHGRAQLTLAGAGEL
LAEDLRQAQHALGEITGAFSSDDLLGRIFSSFCIGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgtgcgtgaaaccatcgccgccatcgccaccgcccaaggccgcggtggtgta
ggtattgtcaggctgtccggccccttggctggcaaggcaggccagttgatcaccggtcgc
acgctgaccccgcggcatgcccattacggcccgttccgcgacgatgacgggcttgtgctg
gacgaagggatagcgctgttcttccctgggccgaattcgttcacgggtgaggacgtgctc
gaactgcagggccatggcggcccagtggtcctcgacatgctgctgcagcgctgtgtacaa
gtggggtgccggctcgcccggccgggtgaattcagcgagcgcgcgttcctcaacgacaag
ctcgacctggctcaggcagaagccatcgccgacctgatcgaggccagttccagccaggcg
gcgcgcaatgccctgcgctcgctgcagggggaattctccaagcgtgtgcacagcctgacc
gaggccttgattgccctgcgcatctacgtcgaggcggcgatcgacttccctgaggaggaa
atcgactttctcgccgatggccacgtactgtcgatgctcgatgctgtgcgcggcgagtta
tccaccgtgcagcgtgaggccgggcagggggcattgctgcgtgacggtatgactgtggtt
atcgccggccggcccaatgctggaaaatcaagcttgctgaaccagctggccggtcgggaa
gcagccatcgtcaccgatatcgccggcaccacccgggacatcctgcgtgaacatatccac
atcgacggtatgccgctgcatgtggtcgataccgccggtttgcgtgataccgatgaccat
gtggagaaaatcggtgtggaacgcgccctgaaggccattggcgaggctgatcgtgtgctg
ctggtggtcgactccaccgcgcccgaagcaagcgacccattcgcgctgtggcccgagttt
ctcgaccagcggccagacccggccaaggtcacgctgattcgtaacaaggctgatctgagt
ggtgagcacgtagggctggagcagtgcgatgacggccatgtgaccattaccctcagcgcc
aagggcgacgacacggggttgcaactgctgcgcgaccatctcaaggcctgtatgggttac
gaacagactgcagagagtggcttcagtgcccgccggcgccacctggatgccttgcgccag
gctagcgagcatctggagcacggccgtgcccaattgaccttggcgggcgcaggagagctc
ctggctgaagacttgcgccaggcacagcatgccctgggggaaattaccggggcattcagc
tcggatgacctgctggggcggattttctccagcttctgcatcggcaagtaa
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