Pelodictyon phaeoclathratiforme: Ppha_0382
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Entry
Ppha_0382 CDS
T00731
Name
(GenBank) ABC transporter related
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pph
Pelodictyon phaeoclathratiforme
Pathway
pph02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pph00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ppha_0382
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pph02000
]
Ppha_0382
Enzymes [BR:
pph01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Ppha_0382
Transporters [BR:
pph02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Ppha_0382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
AAA_22
ABC_membrane_2
DEAD
nSTAND3
RsgA_GTPase
AAA_25
AAA_16
AAA_30
DUF87
DUF815
AAA_21
AAA_24
SPT_ssu-like
Rad17
Motif
Other DBs
NCBI-ProteinID:
ACF42711
UniProt:
B4SCD1
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All DBs
Position
367353..369278
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AA seq
641 aa
AA seq
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MKLFIRLVRYLLPSKGKIVLVVVVSIMSSLLGVVSIYSVLPLLNAVFTAESTIDAPVHLE
AKAPGEKRVEKKESSGLGAFQGIDTEKLKASVTENFEEIFHAETKERTLLNICLFLIASF
AVKNLFVYLNGQIIFRIQTKTAKKLRDDVFSNIIEMHLDYFNKNRVGNLMNLVYNDVQAV
NNTVSSTFVNFLQNPFSVFVYVTVLVVLSWKLTLFASLTSLMIFFVIRTIGKQVKGLATS
FRNTMGDMNSVLQEKFSGIKVIKSSAFENVELERFQAFTRGFRNLDIRIARLRNIIGPLN
ETLLVAAIALVLWFGGLQVFEGRMTSSELILFAFTLYSTMGPIKMFGDVNTQMALGMISA
ERLFELLDTVPDIKNGTRAIKGFEHDIRFEDVCFKYAKDSDAPNVLDHVSFELNKGEMVA
LVGQSGSGKSTAVDLLLRFYDVDSGRITIDGIDIREYDFKQLRRMIGVVSQEVILFNDTI
KANIAYGTHDEVGLERVIVAAKMANANQFIEEKPEQYDTLIGDRGVQLSGGQRQRLAIAR
AMVKNPELLIFDEATSALDNESEKVVQQAIDHALENRTALVVAHRLSTIRNADRIIVMDR
GRAAESGNHEELLQINGLYKHLYEIQFSGKVVENGASLPVS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatttataaggcttgttcgttacctcctgccttccaaggggaagatagtactt
gtcgtcgtcgtcagtatcatgtcttctctgcttggtgtggtttcaatctattcagtgctt
cctcttttgaatgccgtctttactgctgaaagcaccattgatgctccagtgcatttggag
gcaaaggctccaggggaaaagagagtggaaaaaaaagaaagctccggtttgggtgcattc
cagggtattgatacagaaaaacttaaagcttcggttaccgagaatttcgaagagatattt
catgcagagactaaagaacgtacgcttctcaatatctgcctttttctgattgcatcgttt
gctgtcaagaatctctttgtctatctgaacggtcagatcattttcaggattcagaccaag
acagcaaaaaaactccgtgatgatgtgttcagtaacatcattgagatgcacctcgattat
ttcaacaaaaatcgggttggtaacttgatgaacctggtctacaacgatgtgcaggccgtt
aacaatactgtaagctcaactttcgtcaattttcttcagaatcctttttcagtatttgta
tacgtcactgttcttgttgtgctgagctggaagcttacgctttttgcatccttgacgtca
ctgatgatattttttgttatacgtactattggcaagcaggtcaagggtcttgccaccagt
ttccgtaatacgatgggggatatgaactccgttttacaggaaaaattcagcggtatcaag
gttatcaagtcgagtgcattcgaaaatgtagaacttgaacgttttcaagcgtttacccgt
ggatttcggaatcttgatattcggattgcacgattgcgcaatataattgggccgctgaat
gaaacactgcttgttgcagcaatagctcttgttctctggtttggcgggctgcaggtattt
gagggaaggatgacctcatcagaacttattttgttcgcttttaccctctattcaacaatg
gggccaatcaagatgtttggtgatgtcaatacccagatggcccttggtatgatctctgca
gagcgtttatttgagctgctggatacggttcctgatataaaaaatggtacacgtgcaatt
aaaggctttgagcatgatatcaggtttgaggatgtctgttttaaatatgccaaggattct
gatgctccgaatgtacttgaccatgtctccttcgagctcaataaaggtgagatggtggca
cttgtaggtcaatccggatctggaaagtctacggcagttgatctgcttctgcgcttttac
gatgttgattcaggcaggataactatagatgggattgatattcgggaatatgattttaag
caattgcgcagaatgatcggtgttgtcagtcaggaggtaattttgttcaacgacacaatc
aaggctaatatcgcttatggcactcatgatgaggttggtctggagagggttattgttgcg
gcaaaaatggcgaatgccaatcagtttattgaagaaaagccggagcagtatgatacgtta
ataggcgacaggggggtacagttgtcaggcggacagcgtcagcggcttgctatcgctcgt
gccatggtaaaaaatcccgaactgttgatttttgatgaggcaacaagtgctcttgataat
gaatctgagaaggtggtacaacaggcgattgatcatgctcttgaaaatcgtaccgcgctt
gttgtggcacatcggctctctactatcaggaatgccgatagaattattgttatggatcgg
ggccgggctgctgagtcgggtaatcacgaagaacttcttcagattaatggcttatacaag
cacctttatgaaattcagttttcaggaaaggtggtggaaaacggggcatcattacctgta
tcctga
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