Pelodictyon phaeoclathratiforme: Ppha_0452
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Entry
Ppha_0452 CDS
T00731
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
pph
Pelodictyon phaeoclathratiforme
Pathway
pph03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pph00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Ppha_0452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pph03011
]
Ppha_0452
Ribosome [BR:
pph03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Ppha_0452
Bacteria
Ppha_0452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
DUF2110
PCB_OB
MRP-S35
DRTGG
Propeptide_C25
Motif
Other DBs
NCBI-ProteinID:
ACF42778
UniProt:
B4SCU4
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All DBs
Position
438070..439848
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AA seq
592 aa
AA seq
DB search
MAEAFTQEKKVKERPARKKLKFFAHYEPAELALMEQLYSSTLNEITEDEIIKGRIVSISN
KDVTIDVGFKSEGIVSLLEFRAEDEVQVGDDVEVYLENIEDKMGQLILSKKKADVLRIWD
KIYDSIENDTIINGKIINRVKGGMTVSLSGVEAFLPGSQIDVKPVRDFDALVGQTMDFRV
VKINPVTQNIVVSHKVILEEAYAARREEMLANIKVGMVLEGTVKNITDFGIFVDLGGLDG
LVHITDITWGRINHPSEVVDLDQPIKVVVVGFDENTKRVSLGMKQLESHPWENIEVKYPV
TSKAQGRVVSITDYGAFVEIEKGIEGLVHISEMSWTQHIKHPGQFVTLGQEVECVILNID
KDHTKLSLSMKRVNEDPWIALSEKYIEGSLHKGTVSNITDFGVFVELEPGVDGLVHISDL
SWTKKIRHPSELVKKNQDLEVKVLKFDVHARRIALGHKQINQDPWDEFEQKYAVGAETPG
EISQIIEKGVIVILPGDVDGFVPVSHLLQGGVKDIHSSFKIGDALPLRVIEFDKENKRII
LSALEYFKDKNKEEIEAYLAAHPNEKKEIEAATAELEPPVKSSEKKVSESVK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcattcacacaggaaaaaaaggtcaaggaaagaccggcaagaaaaaaactc
aaattttttgcgcattacgagcccgctgaacttgcattgatggagcagctttattcaagc
acgctcaacgaaatcaccgaagacgaaattatcaagggcagaattgtctcgatatccaac
aaggatgttaccattgatgttggtttcaagtcggaaggtatcgtctctctgcttgaattc
agggctgaagatgaagtacaggtaggcgatgatgttgaagtctatcttgagaacatcgaa
gacaagatgggacagctcattctttccaagaagaaagccgatgttctgagaatctgggac
aagatctatgattcaatcgagaacgataccatcatcaatggcaagatcatcaatcgtgtc
aagggtggcatgacggtctccctttctggtgtcgaagccttccttcccggttcgcagatt
gatgtaaagccggttcgtgatttcgatgcccttgttggccagaccatggacttcagggtt
gtcaaaatcaatccggttacccagaatattgttgtcagccataaagttattctcgaagag
gcttatgccgcccgtcgtgaagagatgctcgccaacatcaaggttggcatggtactcgaa
ggcacagtcaagaacatcaccgacttcggtatctttgtcgatcttggcggtctggacggt
ctggtacacattaccgatatcacctggggcagaatcaaccatccttcagaggttgttgat
cttgaccagcccatcaaggttgtggttgtcggctttgacgagaacaccaagagagtctct
cttggcatgaaacagcttgaatcacatccttgggaaaatatcgaggtcaaatatcccgtc
acatccaaggcacagggtcgtgttgtctccattaccgattacggcgcttttgttgaaatc
gaaaagggtatcgaaggcctcgtccacatctcggaaatgagttggacccagcacatcaag
catccagggcagttcgtcaccttggggcaggaagtcgaatgtgtgatcctcaatatcgac
aaggatcataccaagctctccctctccatgaaacgggtgaacgaagatccatggattgcc
ctttcagaaaaatatatcgaaggttcactgcacaagggaacagtcagcaacatcaccgat
ttcggtgtctttgttgagcttgagcccggtgttgacggtctggtacacatttccgacctc
tcatggaccaaaaaaatccgtcatccaagtgaactggtcaaaaagaaccaggatctggaa
gtcaaagtactcaagtttgacgtacatgcacgccgtattgccctcggtcacaagcagatc
aaccaggatccctgggacgagttcgagcagaaatatgcagtaggcgccgaaacacccgga
gagatctcacagatcatcgagaaaggcgttattgtcattcttcctggagatgtcgatgga
tttgttccagtatcacatctgcttcagggtggcgtaaaggatattcactcatccttcaag
attggtgatgccctgccgcttcgtgtcattgaattcgacaaggagaacaagcgcatcatt
ctctcagcccttgagtacttcaaagacaaaaacaaggaagagatcgaagcctacctggca
gctcatcccaatgagaaaaaagagattgaggcagcaaccgctgaactcgaacctccggtc
aaatccagcgagaaaaaagtgagcgaaagcgttaaataa
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