Pelodictyon phaeoclathratiforme: Ppha_0655
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Entry
Ppha_0655 CDS
T00731
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pph
Pelodictyon phaeoclathratiforme
Pathway
pph03030
DNA replication
pph03410
Base excision repair
pph03420
Nucleotide excision repair
pph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ppha_0655
03410 Base excision repair
Ppha_0655
03420 Nucleotide excision repair
Ppha_0655
03440 Homologous recombination
Ppha_0655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pph03032
]
Ppha_0655
03400 DNA repair and recombination proteins [BR:
pph03400
]
Ppha_0655
Enzymes [BR:
pph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ppha_0655
DNA replication proteins [BR:
pph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Ppha_0655
DNA repair and recombination proteins [BR:
pph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Ppha_0655
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ppha_0655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACF42954
UniProt:
B4SDW3
LinkDB
All DBs
Position
complement(671248..674082)
Genome browser
AA seq
944 aa
AA seq
DB search
MNNRQLDFFPPANPEERIKNPATITKKPALFLLDGMAIVYRSFYALQRTGMTSQEGMPTG
AIYGFASTLLKIFETYRPQYLAAVFDSKEKTFRHDLYPLYKANRQAPPEDLIMQLDAIFK
LLEAFDIPLIKTPGYEADDLIGTASRKFSPMCQVYIVTPDKDLAQLVHEGVNILKPGKNQ
NELELLGKKEIIEQFGVPPELFIPFLTLTGDTSDNIPGAKGIGPKTAISLLDQYGSLQNI
YNHLDTISPKNRQSLEAFQPTLDLITQLVTIRTDLQIDVTLKELACGLPDPAKLFPLLQK
LGLKTISSRILALFGELQQAPSATAPLHEEPSSPFHEEEPALRSPRENADYARIDTVDKL
MELMESLHDARHIAVDTETTSLDTFEAELAGISIAVETGKARFISFAQSALDRDKTVEIL
KPLLENPSLPKIGQNLKYDMLVLKKYGIELSPVAFDTMLASYVLNPEEKHNLDDLAAHHL
GYRTTTFDELVGTGKTKQHIFEVDPEKLSDYACQDADLALQLEGVFRKKLDGETELLWLC
ENIEFPLVTVLAEMEYAGICIDTHHLEKASERVKKELELLTETIYAAAGSAFNIDSPKQL
AHILFDLLALPPKKRTKTGYSTNVEVLEELATLFPIARDLLEYRSLQKLKSTYIDALPKM
VNPLTGRLHTTFNQFITATGRLSSSNPNLQNIPIRSPLGKEIRRAFIPSTPENWLLSADY
SQIELRIAAEISGDPQLLEAFRNREDIHTATAKVIFDTDEITSDMRRKAKEVNFGVLYGI
MPFGLSRRLNIPQKEAKAIIDTYISKYPGLFKALQEIIVTGREKGYVTTILGRRRYLADL
NSRNTNLKKAAERAAMNTPIQGTAADIIKCAMNLCSSRMRHLNMKSVMLLQVHDELLFET
TDAEKEPLSKLVEQAMIDAAIRCGLKNVPVLVDTGIGKNWLEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcggcagctcgacttcttcccgccagccaatccggaagagagaatcaagaac
ccggcaaccatcacaaaaaaaccagcactctttctgctcgacggcatggccatcgtttac
cgctccttttatgccctgcaacggacgggcatgacaagtcaggagggcatgccgaccgga
gctatttatggctttgcatccacattgcttaaaatctttgaaacctacaggccacaatac
cttgcagcggtatttgacagcaaggaaaaaaccttccgacacgatctttatcctctttac
aaagccaatcgacaggcgccacccgaagatctcatcatgcaacttgacgccattttcaag
ctgcttgaagcgtttgatattccgctcattaaaaccccgggatacgaagcggacgatctt
attggcaccgcctcccgtaaattcagcccaatgtgccaggtctatattgtcacccccgac
aaggatcttgcccaactggtccatgagggagtaaacatcctcaaacccggcaaaaaccag
aatgagcttgaactgcttgggaaaaaagagattatcgaacagttcggggttccccctgag
ctttttatcccgttcctcaccctcaccggcgacacctccgacaatattcccggagcaaaa
gggattggcccgaaaaccgccatctccctgcttgaccaatacggttccctgcagaatatc
tacaaccatctcgacacgatctccccgaaaaaccgccaaagccttgaagcatttcaaccc
acgcttgatctgataacacaactggtcaccatacgcaccgatttacagatcgacgttacc
ctgaaagagcttgcctgcggattacctgacccggcaaagcttttcccgctgctgcaaaaa
ctcggtcttaaaaccatttcctcaagaatattggctctttttggcgagcttcagcaagcg
ccctcagcaacagctccgctccatgaggaaccctcctccccttttcatgaagaagagccc
gctctccgatcaccccgggagaatgccgactatgcccgtatcgacacagtcgataaactg
atggaactgatggagtctctgcacgatgcccggcatattgccgtcgacacggaaaccacc
agtcttgacacctttgaagccgaactggcagggatatcgatcgcggttgaaacaggaaaa
gcgcgatttatctctttcgcgcagagcgcccttgaccgggataaaacagtcgaaatcctg
aaaccgctccttgaaaatccatccctgccgaaaattggccagaacctcaaatatgacatg
ctcgttctcaaaaaatacggcatagagctctctcctgttgcattcgacaccatgcttgcg
agctatgtgctcaatcctgaagaaaaacataaccttgacgacctggccgcccaccacctc
ggctaccgaacgacaacctttgatgaattggttggaaccggaaaaacaaaacagcatatt
ttcgaggttgatcccgaaaagctctcagactatgcctgccaggatgccgatcttgctctt
cagcttgagggtgttttccgcaaaaaactcgacggagaaactgaactgctctggctttgc
gaaaacattgagttcccgctggtcacagtccttgccgaaatggaatatgccggcatatgc
atcgacacccaccatcttgaaaaggcttccgaacgggttaaaaaagagctcgagctcctg
acagaaacaatttatgctgcagcaggctccgccttcaacatcgattcccccaaacagctt
gcccatattctctttgatctccttgcgcttccaccaaaaaagagaacaaaaacaggctat
tcaaccaatgttgaagtgcttgaggagcttgcgacactctttcccatcgcacgtgacctc
ctcgaataccgaagcctgcagaaactcaagagtacctatatcgacgccttgccaaaaatg
gtcaatcctctgacaggtcggttgcatactacatttaatcaattcatcacggcaactggc
cgactctcctcttccaatccaaacctgcaaaacatacccatacgcagtcccctcggcaaa
gagatacgcagggcatttataccttcaacacctgaaaactggctactctctgcagactat
tcgcagattgaactcagaattgctgcagaaatttccggagatcctcaactcctcgaagca
ttccgcaaccgggaagacattcacaccgcaacagcaaaggtaattttcgacaccgatgaa
attaccagcgatatgagacgcaaggcaaaagaggtgaattttggagttctttacggcatc
atgccatttggcctctcacgaagactcaatattccccaaaaagaggccaaggccattatc
gacacctacatctcgaaatatcccgggctcttcaaggcattgcaggaaattattgtaacc
ggaagggaaaaagggtatgtcacaacgatcctcggacgtcgtcgttatcttgctgatctc
aacagcaggaataccaacctgaaaaaagcggcagaaagagctgccatgaatacgccgatt
cagggcacagccgctgatatcatcaaatgcgccatgaacctctgcagcagcaggatgcgc
catctgaacatgaaatcagtcatgcttctccaggtacatgacgaactgctctttgaaacc
actgatgcagaaaaagagccgctttcaaaacttgtagaacaggcaatgattgatgcagca
atacgttgcggactaaaaaatgtccctgttctggtcgataccggcattggaaaaaactgg
ctggaagcccactaa
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