Pelodictyon phaeoclathratiforme: Ppha_1204
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Entry
Ppha_1204 CDS
T00731
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pph
Pelodictyon phaeoclathratiforme
Brite
KEGG Orthology (KO) [BR:
pph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pph03400
]
Ppha_1204
DNA repair and recombination proteins [BR:
pph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ppha_1204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_16
AAA_14
Rad51
AAA
AAA_22
NACHT
nSTAND3
AAA_5
AAA_24
CobU
NTPase_1
ABC_tran
DUF7125
PAXNEB
RsgA_GTPase
RNA_helicase
DAP3
TackOD1
Zn_ribbon_PADR1
Motif
Other DBs
NCBI-ProteinID:
ACF43476
UniProt:
B4SGR3
LinkDB
All DBs
Position
complement(1258698..1260071)
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AA seq
457 aa
AA seq
DB search
MARSSTRYICSNCGAISLKYQGKCFECQSWGTLQESRVEPEQKKQRDGSTRGVAVMENLH
DSVPSEFQRVMTGIGELDRVLGGGLMQGSAVLVGGEPGIGKSTLMLQLAPRLAPAKVLYI
SGEESPNQIRERAQRLSIKAPNLWLIPEVNLESILAIIAHEKPALVIIDSIQTVHSDEYQ
SSAGTITQIRECAATLIRAAKQQNVILMIIGHITKEGALAGPKALEHMVDTVLQFEGEGY
QRYRIIRSVKNRFGSTNEIGVFRMDESGLEEVSNPSEFFISGRRTDVPGNSILAAIEGTR
ALLVEVQALVSKTNYSMPQRISTGFDLKRMSIILAVLENRLRIETWGQDVFVKIAGGLKL
AEPAADLAIAAAIASGLMNRPVDPATVCCGEIGLAGELRAISDSERRIREAAHLGFKQIV
LPEANTRELKPSLKNLPIIITGCKTLQNALDELNVTG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccagatcttctaccagatacatctgctctaactgcggggccatctccctgaaatat
caggggaaatgttttgaatgccagagttgggggacacttcaggagagccgtgtcgagccc
gaacagaaaaaacagagggatggttcaacaagaggagttgccgttatggagaacctgcat
gactctgtgccctcggaatttcagcgagtcatgactggcattggagagctcgaccgggta
ctcggaggaggacttatgcagggatctgctgttctggtgggaggagaacccggtattggt
aaatctaccctcatgctccagcttgctccccgcctcgcaccggccaaggtgctctatatc
tccggtgaagagtcgccgaaccagatccgcgaacgggcacagcgcctctccattaaggct
cctaacctctggctgataccggaagtgaaccttgagagcatccttgcaatcattgcacac
gagaaaccggcactggtcattattgattccattcagacagtccattctgatgaataccag
agttctgccggtaccattacccagatcagggagtgtgctgccacgctcatcagggcggcc
aagcagcaaaatgtgattttgatgattatcggccatatcaccaaggagggtgcgcttgcc
ggacccaaagcccttgagcatatggtcgataccgtcctgcagtttgaaggtgaagggtac
cagcgctaccgcattatccgctcagtcaagaaccgcttcggttccaccaatgaaatcggt
gtcttccgtatggatgagagtggccttgaagaggtcagtaatccgtcggaattctttatc
tccggacgcagaaccgatgtgcccggaaattcaatcctggctgctatcgaaggaacaaga
gcacttctggttgaggttcaggcgctggtctcgaagaccaactactccatgcctcagcgt
atcagcacaggattcgacctgaaacgcatgtcgattatccttgctgtgcttgaaaacagg
cttcgcatcgaaacctggggacaggatgtcttcgtaaaaattgccggcggcctgaaactg
gctgaacccgcagcagaccttgccattgctgctgccattgcttcagggctgatgaaccgt
ccggtcgatccggcaacggtctgctgcggagaaatcggtcttgcaggtgaactgagggct
atcagcgacagcgaacggcgcataagggaggcggcccatcttggcttcaagcaaattgtg
ctgcccgaagccaatacccgcgaactgaaaccatcactgaaaaatctccccatcatcatc
acgggatgcaaaacactccagaacgcacttgatgagcttaatgtgactggataa
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