Pelodictyon phaeoclathratiforme: Ppha_1317
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Entry
Ppha_1317 CDS
T00731
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pph
Pelodictyon phaeoclathratiforme
Brite
KEGG Orthology (KO) [BR:
pph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pph03032
]
Ppha_1317
03036 Chromosome and associated proteins [BR:
pph03036
]
Ppha_1317
03400 DNA repair and recombination proteins [BR:
pph03400
]
Ppha_1317
DNA replication proteins [BR:
pph03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Ppha_1317
Chromosome and associated proteins [BR:
pph03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Ppha_1317
DNA repair and recombination proteins [BR:
pph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Ppha_1317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ACF43582
UniProt:
B4SHB5
LinkDB
All DBs
Position
complement(1383566..1383841)
Genome browser
AA seq
91 aa
AA seq
DB search
MSKNALVEKIADQAQLSKIDADRALKAFVTIVSDSLKNGVDVPLAGFGTFTIVDRAEREG
RNPMTGEAITIAAKKVVKFKPGKALKMDIGA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaatgccttagtagaaaaaattgccgatcaggctcaactgagcaaaattgac
gccgatcgcgccctcaaagcctttgtcactattgtttcagactctttgaaaaatggtgtt
gatgttccccttgccggattcggcacattcacgattgtcgaccgcgctgaacgggaaggg
cgcaatcccatgaccggcgaggcaattaccattgctgcaaaaaaggttgtcaagtttaaa
ccaggaaaagctttaaaaatggatatcggcgcataa
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