Pelodictyon phaeoclathratiforme: Ppha_1423
Help
Entry
Ppha_1423 CDS
T00731
Name
(GenBank) DEAD/DEAH box helicase domain protein
Organism
pph
Pelodictyon phaeoclathratiforme
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
MZB
Motif
Other DBs
NCBI-ProteinID:
ACF43682
UniProt:
B4S9Y6
LinkDB
All DBs
Position
complement(1487782..1492953)
Genome browser
AA seq
1723 aa
AA seq
DB search
MNVFKTHASIIEDYSSYIHSFISIADPDISQVVDRALSTGKLWPEPLLQFNPSFEMFGGL
EKLIESKTLHGAIGDIFKGYKLYRHQVEAIRLGTSGKDFIVTSGTGSGKSLTYIGSIFHH
LLSNPATKGVTAVVVYPMNALINSQFEEFTRYKKNYEDATGKEFPIIFGQYTGQEGEEAR
EKMRKNPPHILLTNYMMLELLLTRVRERNIRESIYLNLRFLVFDELHTYRGRQGADVSML
IRRIRSNCVQQIVSIGTSATMVSDSVGDIEHQKAEVANVATKLFGCQFTTEQVINEKLAR
SLSPNGTIPASHFLASAIESAINQDSDIEALKKNPIAIWLENKIALEERGTDLVRGKPKR
LREIASELANDSGMAEERCRLYLVDLLLWISVSNVRQQESGERYTFLPYKLHQFISQTGS
VYTTLDQDEKRDISLEPGVYKVDETDKKPIFPNVFSRGSGHPFICVSLAGNRLEPREFRD
MTEDEESNDGYLIIGEEIWNLDEDIEMLPESWFRRTKSGVTLDSKKRGYFPVKLWFDEFG
NCSDKEEKKWWGWFMKAPLLFDPTSGGFFDTRTNEGTKLTKLGSEGRSTSTTITAFSILN
RLSDAGYAIKEQKLLSFTDNRQDAALQAGHFNDFVQVIRLRAGIHKALQQAPVGMLTFAT
LGEAVFKALGLPFLEYANRSEESMLAPIRRKYEQALQDFLLYRSMADLRRSWRVVLPNLE
QCALLTIEYEDLDEIIATDAFWAVSPLFGSLNHTDRKELVTTILDFFRLEYAIHSENFLT
QSRIQESERQFRESLKQPWTLDRNEKLQEPYYIRYQKLSKTAKLYTKSMGPASSLGKFIR
DYVKRQNLGIDLKKEGYKNLIMQTMEMLEQADYLKSFPARSEQNEEVLIYRLRLEKVIWK
AGEGLTVKADIIKRRTYKKQRPEPNLFFKTLYCRDFSTMKRLRSEDHTGQLSNEARLDRE
ERFRADWYTDEGKRVADQQKIRAESISVLFCSPTMELGVDIGSLNVVHMRNAPPNPSNYA
QRSGRAGRSGQGALIFTYCSSYAPHDRHYFNNQRELVAGTVMAPRLDLNNEELLRAHLHA
LVASEVGIPGLDEGNGSRPSIMHLVTDDNNKMPLAESVRAGLQLSPVQFDRIKANFRRVI
RDFEPELEAKAAWYSDQWIEQNLSKIIETLDEALDRWRLIYRSARAILTRATQKIESGTL
SLGSEEYRKYKRHQDQATRQLDLLRNHLSGKASELSEFYPWRYLASEGFLPGYNFTRLPL
RVFLPDGDSAGLFVSRPRSLALREFGPQNIIYHSGRKYRVCQLIMQDTESSLTEAKISTR
SGYFLPIDQKDLEICPFSGLNLGDNANKLHIHDLLEMSESRAEEVDRISCEEEERLSKGF
DIRTFFTVDGGQVERVRKAIVSSSEGSLLNVRYIPAARLVHINFKWKAQETEGFPIGMVS
GDWRSSLPDQEAQSSEQFRRVKLMTSNLADALYIEPIQPLGLTPDGVITLQHALKRAIEL
IFQVEPREIGVVTVGDPEAPNILLYEAAEGSLGILSQFVENVHAFHQVVKQAIELCRYDD
PEYKGPASYNDLLSYYNQRDHKVIDRHLIKEALEKLMLCTIEIQTNKSYNNYEEHYQTLL
GGIDPNSSTERKFLDFLYKNGIRLPDAAQKRVEGIYAQPDFYYEPRIWVFCDGTPHDNTE
VQEKDEALRQAIIAKGDEVWTYYYRDNLAEKVAGRPDIFRKVK
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcttcaagactcacgcaagtatcatagaggattattcttcctacatccacagt
ttcatctccattgctgacccggacatcagccaggttgttgatcgtgcattaagtacgggc
aagctatggccagagccacttttgcagtttaacccttcgtttgagatgttcggtgggctc
gaaaagcttattgaatcgaaaacgttgcatggggccattggcgacattttcaaagggtac
aaactctatcgccatcaggttgaggcaatacgattgggcaccagcggcaaggattttatc
gttacatccggcaccggctcgggcaagtcgttgacctatatcggttctatttttcaccat
cttctttcgaacccggcaacaaaaggggttactgcggttgtcgtctatcccatgaatgcc
ctcattaactcgcagttcgaagagttcacccgatacaaaaagaattatgaggatgccacc
ggcaaagagtttccgatcatctttggccagtatacaggtcaggagggtgaggaggcaagg
gaaaaaatgcggaagaacccgccgcatattctcttgaccaactacatgatgctggagctg
ttgttaacccgcgtacgtgaacgcaacattcgagagagcatctacctgaatctccggttt
ctggtcttcgatgaactgcacacctatcgaggtcggcagggtgcggatgtttccatgttg
attcgacggattcgatccaattgtgtccaacagattgtgagtataggtacctctgccacc
atggtttctgatagtgttggtgatattgagcatcagaaagcagaggttgccaacgttgcc
accaaactctttggctgccaattcaccacagagcaggttatcaacgaaaagcttgcccgt
tcactttctcccaacggcacgattcctgccagccatttccttgcatcggccattgagtca
gccattaatcaggactccgatattgaggcactcaaaaagaatccgattgccatctggctg
gagaacaaaattgcacttgaagagcgaggaactgatcttgttcggggaaaaccaaagcgg
ctgagagagatagcttcagaattggcaaacgattccggaatggctgaagagaggtgccgt
ctttatctggtggatctactcctctggatcagcgtctccaatgttcggcagcaagagtcg
ggagagcgctacacctttctgccctacaagctccatcagtttatttcgcaaacgggttct
gtctatacaacccttgatcaggatgagaagcgcgatatctctcttgagcccggggtctat
aaagttgatgagaccgacaaaaaaccaatatttcccaatgtcttcagtcgtggaagcggc
catcccttcatctgcgtctcccttgcaggtaaccgattggagccacgtgaatttcgtgac
atgaccgaagatgaggagagcaatgacggttacttgattattggcgaagagatctggaat
ctcgatgaagatattgaaatgctgcccgaatcctggtttcgcagaacaaagtcgggtgtt
acgctcgacagcaaaaaaaggggatactttcccgttaaactctggtttgacgaattcgga
aactgctccgacaaagaagaaaaaaaatggtggggctggttcatgaaggctccgttactt
tttgatcccacatcgggcggtttttttgataccagaaccaatgagggcaccaaactgacc
aagctgggcagcgaagggcgcagtacctccactaccatcaccgccttctccattctcaat
cgtctcagtgacgctggctacgcgataaaagagcagaagctgctcagctttaccgataat
cgtcaggatgcggccctgcaggcaggacatttcaatgactttgtgcaggtcattcgcctt
cgtgcaggcattcataaggcattgcagcaggcaccagtgggcatgctcacctttgccacc
cttggcgaggccgttttcaaggcgcttgggctaccgtttcttgagtatgccaacagaagc
gaggagtcgatgttggctccaatccggcgaaaatatgagcaggcgcttcaggatttcctg
ctctatcgttccatggctgacctccggcggagctggcgagtagtattgcccaacctcgaa
caatgcgccctgttgaccatagagtacgaggatctggatgaaattatcgctaccgatgca
ttctgggccgtatcgccgctttttggatcgttgaatcatactgatcgtaaagagctggtg
accaccatactcgattttttccggcttgaatatgccatacacagcgaaaactttcttacc
cagtcacgcatacaggaatccgagcggcagttccgcgagtcgttaaaacagccctggact
ctcgatcgtaatgagaagcttcaggaaccctactacatccgctatcaaaagctcagcaaa
accgccaaactctacaccaaaagcatggggcccgccagctctctggggaagttcatcagg
gattatgtcaaacggcaaaaccttgggatcgacctgaaaaaagaggggtataaaaacctg
atcatgcagacgatggagatgctggaacaggccgactatctgaaatcatttcctgcccgg
agcgagcagaatgaagaggtactcatctaccgtttacgactcgaaaaggttatctggaaa
gcgggggaggggctgacggtcaaggcagacattatcaaacgacgcacctataaaaagcag
agacccgagcccaatctctttttcaaaacgctctattgtcgtgatttctcaaccatgaaa
cggctgcgaagtgaagaccataccggacagttgagtaatgaagcacggctggatcgtgaa
gagcgattccgggccgattggtacaccgatgaaggcaagcgggtggctgaccagcaaaag
ataagagccgaatcaatcagcgtgcttttctgctccccgaccatggaacttggcgttgat
atcggttcactcaatgttgtccacatgcgcaacgctcctccaaacccctccaactatgcc
cagcgttcaggcagagcaggccggagtggtcagggagcacttatctttacctactgctca
agttatgccccccatgatcgccactactttaacaatcagcgcgaactggttgcaggtacg
gtcatggcgccgcgtctcgatctgaataatgaggagctgctgcgtgcccatttgcacgct
ctggtagcctcagaggttggcattcccggccttgatgagggtaacggctcaagaccctca
atcatgcatcttgtgaccgatgacaataacaagatgcctcttgccgagagcgttcgggcc
gggcttcagctctctccggtacagtttgatcggataaaagccaatttcagaagggtaatc
cgcgattttgaaccggaactggaagcaaaagccgcatggtattccgatcaatggattgag
cagaacctttcgaagattattgaaaccctcgatgaagcactcgatcgctggcggctcatc
taccgttcggcaagggcaattctgaccagagctacccagaagatcgaaagcggcacgctg
agccttggcagcgaagagtatcgcaaatacaaacgccatcaggatcaggccacccgtcaa
ctggacctgcttcgcaatcatctttccggcaaggcatcggaactctccgagttctatccc
tggcgttatcttgcttccgaagggttcctgcccggctacaactttacacgacttcctctt
cgtgtctttttacccgacggtgattctgccgggctctttgtctcccgcccccgctctctg
gccctccgggagttcgggccccagaatatcatctatcacagcgggcggaagtaccgggtg
tgccagttgattatgcaggataccgaatcctctcttaccgaggcaaaaatcagcacccgg
tcaggatatttcctccccatagatcagaaggatcttgaaatctgtcctttttcagggttg
aatcttggcgacaatgccaacaagctgcacattcatgatttgctggaaatgtcggaatcc
cgcgctgaagaggtggatcgtatctcctgcgaagaggaggaacggctctccaaaggcttt
gatatccgaaccttctttaccgttgacggcggccaggttgagcgggtacgtaaggccatc
gtctccagcagtgaaggtagcctgctgaatgtgcggtacatcccggcagcccggcttgtc
catatcaacttcaaatggaaggctcaggagacggaggggtttcccatcggcatggtctct
ggcgactggcgcagctctcttcctgatcaggaggcccagagcagtgagcaattccggcga
gtgaaattgatgacctcaaaccttgccgatgccttgtatatcgagccgattcaaccgctt
ggattaactcccgacggggtgattacgctccagcacgccctgaagagagccatcgaactt
atctttcaagtggaaccacgagagatcggtgtggtaacagtcggcgacccggaagccccc
aatatcctgctctatgaagcggcggaagggagccttggcatcctctcccagtttgtcgaa
aatgttcacgctttccatcaggtggtcaagcaggccatagaactttgccgttatgatgat
cctgaatacaaaggaccagcctcatacaatgacttgctcagttattacaaccagcgtgac
cacaaagtcattgaccgtcacctcatcaaggaggcgcttgaaaagctgatgctctgcacc
atcgagattcagaccaacaaaagttataacaactacgaagagcactaccagacgctgctc
ggcgggatcgatcccaattcgagtaccgagcggaagttccttgattttctctataaaaac
ggcattcgcctgcccgatgccgcccagaagagggtagagggaatctatgcgcaacccgat
ttctattatgaaccccgcatctgggtcttttgcgatggaacaccccacgacaatactgag
gtgcaggaaaaagatgaggcactacgccaggccatcattgccaagggtgatgaggtctgg
acatattattacagggacaatctggccgaaaaggtggccggacgtcctgatattttcagg
aaagtaaaatga
DBGET
integrated database retrieval system
