KEGG   Pelodictyon phaeoclathratiforme: Ppha_1433
Entry
Ppha_1433         CDS       T00731                                 
Name
(GenBank) exodeoxyribonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
pph  Pelodictyon phaeoclathratiforme
Pathway
pph03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pph00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Ppha_1433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pph03400]
    Ppha_1433
Enzymes [BR:pph01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Ppha_1433
DNA repair and recombination proteins [BR:pph03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Ppha_1433
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_22 AAA_30 PDDEXK_1 AAA_11 ResIII
Other DBs
NCBI-ProteinID: ACF43690
UniProt: B4S9Z4
LinkDB
Position
complement(1504575..1508174)
AA seq 1199 aa
MKPLNHAAVELSGINLIEASAGTGKTYAIASLYLRLLLEKELLPEQILVVTYTEAATQEL
RGRIRSRIREALEVMEGCDTSDIFLGELYETASLSGMKKVRDLLERALGAFDTASIFTIH
GFCLRVLQDNAFESGSLYDTELVTDQTELLRGIVDDFWRVHFFGESAPLLGYALRNRLTP
ETFLSLLKNLHAGTGVEVIPDFSDEQITAIERECSAAYSDASSIWMGHKGSITELLTTEK
GLSRSAKYYRADLLEPLFSGMDAFVEGGNAYDLFESFPKLTLEGILEGTKSKGVAPSHPF
FLSCQRLQDAVERRLLALKAELLRFYQKNLPLRKRIGNIRFFDDLLEDLYHALLPEQGGD
ALAEIIRKKYCAALIDEFQDTDRQQYEIFRSIYATSGLPLFLIGDPKQAIYSFRGADIFA
YIRAAREVGEERRFTLTENWRSSPLLLQAFNTLFNNTMRPFLHDEILYHPLASGKSEPER
ADGAGEDLEPMQLWLMDSSDEKSGMLTVDDAGAWASTAVAGEIVRILQDGQTLFSGRPCS
AGDIAVIVRTHRQAALMLNALHNRGVAGVMRSNQSIFLSREAEEVRILLSALADPGNEPK
VRAALVTDLLGRSGNDIERFHDDEASWIACLRQFRLYHELWHERGCMVMSRELMAKEEVR
GRLLSYPDSSGERRLTNLLHCFELLHREEHERGTGMEGLVAWFSERTGAADETDEYQIRL
ETDDAAVKIVTIHVSKGLEYPVVFCPFLWGGGNRKGEVLMFHDDAGHLVKDFGSSGYESN
RRLADKESLAESLRLLYVALTRAKYRCYLFSGKTRSENSPINYLLHASSATRVSENQASA
LAVESKTLTTGMMAEQLESLAESSEESIGFTLLTREAVDGMARLSRTDRESQHDALVLRH
FSGTIDTTWRVSSFTSFSRHEPISTELPDRDEPQADGGVPSAIVAPAGHEKSIFTFPRGA
QAGIFMHGIFEKLDFASPSETAIHELVAKGLERYNYKEEWQPHITAMIHNVLETPLASRD
SLFTLGALCQKSWITELEFFFPLRFINSSHLAGLLLRHGLLRSGVDLASLAPMLQFSPVR
GMLMGFMDMVFEQNGRYYLLDWKSNHLGNSEEDYAQDAMSVAMQKHLYPLQYLLYTVALN
RYLSLRVKNYRYSTHFGGVIYVFLRGVNREHGENFGFFRDLPPEELIEALTNLLIDEDK
NT seq 3600 nt   +upstreamnt  +downstreamnt
atgaaaccactgaaccatgcagccgtagaactctccggcatcaacctgatcgaggccagt
gccgggacggggaagacctatgctattgcctcgctctaccttcgcctgcttctggaaaaa
gagcttctgccggaacagattcttgtggtaacgtataccgaagcggctacgcaggagctt
cgcggcagaatccgcagtcgtatccgtgaggcgctcgaggtgatggagggttgcgatacc
agcgacatattccttggtgagctatatgaaacggcctctctgagtgggatgaaaaaggtg
cgcgacctccttgaacgggcgctcggcgcttttgataccgcttcgattttcaccattcac
ggcttctgccttcgggtgctgcaggataacgccttcgagagcggctcactctatgatact
gaattggtgactgatcagacagagctgcttcgtggtattgtggatgatttctggagagta
cattttttcggtgagtctgcgccactgctcggctatgccctgcgtaaccgcctcactcct
gaaaccttcctgtcgctgttgaagaaccttcatgccggaaccggggttgaggttatccct
gatttcagtgatgagcagataacggcgattgagagggagtgctcggctgcttacagtgat
gccagttcaatttggatggggcataaaggctcgataactgaacttctgaccactgagaag
ggtttgagccgttcagccaaatattaccgcgctgacctgcttgaaccgcttttttccggg
atggatgcttttgttgaaggaggcaatgcgtatgacctgtttgagtcattcccgaaattg
acccttgagggtattcttgaaggcaccaaaagcaaaggtgtggcgccctcccatcccttt
ttcctttcctgccaacggctccaggatgcagtggagaggcgtcttcttgccctcaaggct
gaactgcttcgcttttatcagaagaacctgccattgcgcaaacgaatcggaaatatccgt
ttttttgatgatctccttgaggatctctaccatgcgcttttgccagagcagggcggggat
gcacttgccgagattatcagaaaaaagtattgcgcagcacttattgatgagtttcaggat
accgaccgccagcagtatgagatcttcaggagcatctatgcgacatccgggttgccgctt
tttctaatcggcgatccaaaacaggccatttacagtttccgtggtgcggatatcttcgcc
tacataagagcagcgcgtgaggtaggtgaggagcggcgctttaccctgacggagaactgg
cgctcttctccgctgctgcttcaggcgttcaataccttgttcaacaatacgatgaggccg
tttctccatgatgaaattctctatcacccgctcgcttcagggaaaagcgagccggagagg
gcggatggagcgggggaagatcttgagccgatgcagctctggctgatggattcgagtgat
gagaagagcggcatgttgactgtggatgatgctggcgcctgggcttcaacggccgttgcc
ggtgagattgtccgaatcctgcaggatggtcaaacccttttcagcggcaggccatgcagt
gccggagatattgccgttattgtgcgcacgcaccggcaggcggctcttatgctcaacgcc
ttgcataaccggggcgttgccggggtcatgcggagcaatcagagtatctttttgtcgaga
gaggctgaagaggtgcgcatcctgctctcagccctcgctgatccgggcaacgagccaaag
gtacgtgcggcgctggtgaccgatctgcttggcaggtcgggcaacgatattgagaggttt
catgatgatgaagcgtcatggatagcctgtctcaggcagttccgactctatcacgagctc
tggcatgagcggggatgtatggtgatgagccgggaactgatggcaaaggaggaggtgcgt
ggacgtctgctcagttaccctgactcttcgggtgagcgaaggctgaccaatctgctgcac
tgttttgaattgctgcaccgtgaggagcatgagcggggaaccggtatggagggacttgta
gcttggttcagtgaacggacaggggctgcggatgagacggacgagtatcaaatccgtctt
gaaaccgatgatgctgccgtaaaaatcgttaccattcacgtcagcaagggactggaatat
ccggttgttttctgcccctttctctggggaggcggaaaccgcaaaggggaggtgctgatg
ttccatgatgatgcggggcatctggtgaaggatttcggctcttccggctatgagagtaac
cggcggcttgccgacaaggagtcgcttgccgaaagcctcagactgctctatgtggcactg
acgagggccaagtatcgctgctatcttttcagcggtaaaacccgttcggagaactcgccg
atcaactatctgctccatgcatcgagtgcaacaagagtttcggaaaatcaggcttcggcg
cttgctgttgaatcaaaaaccctgaccaccgggatgatggccgagcagttggagtcgctc
gccgaaagttcagaagagtcaatcggcttcacgttgttgacgcgcgaagcggttgacggg
atggccagactctcccggacggatagggagtcacagcatgatgcccttgtactgcgccac
ttcagcggaaccattgacaccacctggcgggtttcaagcttcacctcgttcagccgccat
gaaccgataagcaccgagctacctgatcgcgatgaaccacaggctgatgggggagtcccc
tccgcaatcgttgctcccgccggtcatgaaaaaagcatctttacctttccaaggggggct
caggccggaatttttatgcacgggatttttgagaagcttgattttgcctctccctccgaa
acggctatccatgagcttgttgcaaaagggcttgaacgctataactataaagaggagtgg
cagccgcatatcacagccatgattcataacgttcttgagacgcctcttgcttcgcgcgac
agcctgtttactcttggcgctctctgccagaaaagctggatcactgagctggaatttttc
tttccgctccggtttatcaattcatctcatcttgctggccttctgctccgtcatggcctt
ctgcggagtggagttgaccttgcctcgcttgcacccatgctgcagttcagcccggtcagg
gggatgcttatgggcttcatggatatggtttttgagcagaatggccgctactatctgctt
gactggaaatccaatcatcttggtaacagcgaagaggattacgctcaggatgccatgagt
gtggctatgcaaaaacacctctacccgctgcaatacctgttgtataccgtggctctcaac
cgctacctgtcgttaagggtcaaaaactaccgttacagcacccatttcgggggagtaatt
tatgtctttcttcggggagtgaacagggagcacggggaaaacttcggctttttccgcgac
cttccccctgaagagttgattgaagcgctgacaaatctgctgatagatgaggataaataa

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