Pelodictyon phaeoclathratiforme: Ppha_1434
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Entry
Ppha_1434 CDS
T00731
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pph
Pelodictyon phaeoclathratiforme
Pathway
pph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ppha_1434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pph03400
]
Ppha_1434
Enzymes [BR:
pph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Ppha_1434
DNA repair and recombination proteins [BR:
pph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ppha_1434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ACF43691
UniProt:
B4S9Z5
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All DBs
Position
complement(1508171..1511377)
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AA seq
1068 aa
AA seq
DB search
MPLNLYTSNRMEVLVDTLAAALREPLASPFKQEVIVVQSRGMQRWLSMELASRFGVWANG
HYPFPNAMVKELFGALFSEKPDTSSFAPEVMSWRIMRLLPELLDTEPFGTLRRYLADDPD
GLKLFQLSEKIADTFDQYTLFRPEMLSHWEAGESQPAGEEWQPVLWRKLADGEGMHRGRM
KELFCRQLSPLSPEVKEIPERITLFGISYLPKFHLDMLSAVARVTEVNLILLSPTREYWG
DILARKAIVRLPEEERALRMEGNPLLASLGRIGRDFSDMIIDMSDSAFHQEERYDDPGEE
CLLHGLQSDILNLSGTGEEGEQRPLDPLDRSLRIHSCHSPLREIEVLYDNILAMLEESPG
LTLRDIVVMTPDIESYSPYISTVFGAGGNGAGLHYSIADRRMMHEGEIASAVLKLLALPA
SRLAASELFDLLASPPVSRRFLVESDELDVIREWIEKTGIRWGMDEGDRTAKALPSYREN
SWKAGLDRLLLGYAMPDENQLFNGILPYDDLAGSAAETLGKFAGFITSVEAFVNRMERPC
TLEEWRSRFQALLADFILPSSVSEREFATIAALGEKLGEVAAAAEFTQEVTPAVMLSWLR
AHLELQEQGLGFMTGGITFCAMLPMRSIPFRVVVLIGMNDSAFPRQSRAPGFDLIAREPQ
KGDRSLRNEDRYLFLESILSARDLLYISYIGQSIRDNSELPPSVLVSELLDAVRRGFSLP
DGDSVEKQLVVRHPLQAFNRAYYSAGSPLFSYSAENFHALVEKERPAAPSRPFMSVPLDE
PPEEWKTVSLKQLLRFYDNPAGFFLEQRLGIRLEGMVEPLEDREPFAVEGLALYSLKQEL
LEIVLGGGNTLELLPLYRSRGVLPPALHGELLFRKILDEVQQFAATVQEKTAGAGALAPL
EVDLQLGGFRLTGQLVRVWPESLLHYRCAKLKMKDQMRGWIEHLVLNMADQPGYPRKTSL
VMVDNEKQFAPVADAALYLEDLLKYYWQGLSMPLRFFPRSSLAFAAKEDLDAARREWRDD
TFNNRPGEGSDPAIERCFGAADPFDDEFCSLAVELLRPMIQAAGEEAP
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgccacttaacctttacaccagcaaccggatggaagttctggttgatacccttgccgct
gctcttcgcgagccgctggcttcaccgttcaagcaggaggtgattgtggtacagagccgg
gggatgcagcggtggctctccatggagctggcgtcgcggttcggcgtctgggctaacggg
cactatccctttccgaatgcgatggtgaaggagctgttcggggcgctcttttctgaaaag
cctgacacttcatcatttgctccggaggtgatgagctggaggatcatgcggcttttgcct
gagctgctcgacacagagcccttcggcaccttgcgtcgctatcttgctgatgatcctgac
gggctcaagctctttcagttgtcggaaaaaattgctgataccttcgaccagtacacgctc
ttccgtccggagatgctctcccattgggaggcgggggagtcacaacctgccggcgaagag
tggcagccggttctctggcggaagcttgctgacggggagggaatgcatcggggaaggatg
aaggagcttttctgcaggcagttgagccctctgtcgccagaggtgaaggagattcccgag
aggatcacccttttcggcatctcctacctgccaaagttccatctcgatatgctctcggcg
gttgcgagggtgactgaggtgaacctcattcttctgagcccgactcgtgagtactggggc
gatattctcgccaggaaggcgattgtcaggctgccggaggaggagcgggccctgcgcatg
gaggggaatccgcttctcgcttcgcttggcaggatcggacgggatttttcggatatgatt
atcgacatgagcgacagcgcttttcatcaggaggagcgctatgatgatccgggtgaggag
tgcctgcttcacggcctgcagtccgatattctgaacctttcgggtaccggtgaggagggg
gagcagcgcccgcttgacccgcttgaccggtcgctccggattcactcctgccacagtccg
cttcgtgaaatcgaggtgctctacgacaatattcttgccatgcttgaggagtctcccggc
ctgactttgcgcgatattgtggtgatgacgccggatattgagagctattcgccctacatc
tccaccgtgttcggagcaggagggaatggcgccggattgcactactccattgccgaccgg
aggatgatgcatgagggggagattgcttcggcggtgctgaaactgcttgctctgcctgca
agccgccttgccgcatccgaactctttgacctgcttgcctctccgcccgtaagccgccgt
tttttggtggagagtgacgaacttgacgttatccgtgagtggattgaaaaaaccgggatt
cggtgggggatggatgagggcgaccgtacggcgaaggctcttccttcctatcgcgagaac
tcatggaaggcagggcttgaccggctcctgctcggctatgccatgccggacgagaatcag
cttttcaacggcattctgccctacgatgatctggctggttctgcagccgaaaccctcggc
aagtttgccgggttcatcacgtcggttgaagcgtttgtcaacaggatggaacggccctgc
acccttgaggagtggcgcagccggtttcaggcgctgctggccgactttattctcccttcc
agcgtctccgagcgggagtttgcaaccattgccgctcttggcgaaaagcttggtgaggtt
gccgctgcggcggagttcacccaggaagtgacgcctgcggtgatgctctcctggctgagg
gctcaccttgagctgcaggagcaggggctgggcttcatgacgggtggcatcaccttttgc
gccatgctgcccatgcggagcattcccttccgtgttgtcgttttgatcggcatgaacgac
agcgcctttccccgccagagccgcgctccgggatttgacctcattgcgcgtgagccgcag
aagggcgaccgctcattgcgtaatgaagaccgttacctctttcttgagtcgatcctttcg
gcccgtgacctgctctatataagctatatcggccagagcatcagggataacagcgagctg
ccgccctcggtgctggtcagtgaactgctcgatgccgttcgccggggcttttccctgccc
gatggagattccgtcgagaagcaactggtggtacggcaccctttgcaggcttttaaccgg
gcctattactctgcaggctctccgcttttcagctattcggctgagaactttcatgcgctg
gttgaaaaagagcgtcctgcagctccgtcacgcccctttatgagtgttcctcttgatgaa
ccgcctgaggagtggaaaaccgtttcgcttaaacagcttctgcgtttttacgataacccg
gcgggcttttttctggagcagcgtcttggtatcaggcttgaagggatggtggagccgctt
gaggatcgtgaacccttcgcagttgaggggctcgcattgtacagtctgaagcaggagctg
cttgaaattgtgcttggaggagggaatacactcgaactgctcccactctatcggagccgg
ggagtgctcccgcccgccctccatggtgagctgcttttccgtaaaattcttgatgaggtg
cagcagtttgccgcaaccgtgcaggaaaaaaccgctggcgctggcgctctggcaccgctt
gaggtcgatctgcagcttggcggattccgcctgaccggtcagcttgtacgggtgtggcca
gagagcctgttgcactaccgctgcgcgaaactgaagatgaaggatcagatgcgaggctgg
attgagcatctcgtgctcaatatggcagatcagccgggttatccaagaaaaacctctctt
gtcatggttgataatgaaaaacagtttgctccggtggctgatgctgccctgtatctggag
gatcttctgaagtattactggcaggggctctccatgccgctgcgctttttcccgcgttct
tcactggcctttgccgcaaaagaggatctcgatgccgcccgcagggagtggcgtgacgac
accttcaacaaccgcccgggcgagggctccgatccggcaatcgagcgctgctttggcgcc
gcagatccctttgacgatgagttctgctcccttgccgtcgagttgctcaggccgatgatt
caggctgcaggggaggaggcaccatga
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