Pelodictyon phaeoclathratiforme: Ppha_1487
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Entry
Ppha_1487 CDS
T00731
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pph
Pelodictyon phaeoclathratiforme
Pathway
pph00061
Fatty acid biosynthesis
pph00071
Fatty acid degradation
pph01100
Metabolic pathways
pph01212
Fatty acid metabolism
pph02024
Quorum sensing
pph04146
Peroxisome
Module
pph_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pph00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Ppha_1487
00071 Fatty acid degradation
Ppha_1487
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Ppha_1487
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ppha_1487
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pph01004
]
Ppha_1487
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pph04147
]
Ppha_1487
Enzymes [BR:
pph01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Ppha_1487
Lipid biosynthesis proteins [BR:
pph01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Ppha_1487
Exosome [BR:
pph04147
]
Exosomal proteins
Exosomal proteins of breast milk
Ppha_1487
Exosomal proteins of breast cancer cells
Ppha_1487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SidC_C
Motif
Other DBs
NCBI-ProteinID:
ACF43737
UniProt:
B4SA41
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All DBs
Position
1567349..1569181
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AA seq
610 aa
AA seq
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MGLINPGFQTLPELFTSVFNHYRGQSSKFPFARKINGVYEPISYSAFEKDVNSFAAFLKQ
NGIKAKERVAILSENRPGWYLSDMAILNIGAINVPLYPSLPANQIEYILSNCSAKGIIVS
NMLQLGKILSIWQNLPELTLVVVMNRLEETIEDVLDLNQAKARGEKILAEKPWCLEGVPV
EPDDVATIIYTSGTTGLPKGVMLTHRNICENVKSCSSIMRLDESDCSLSFLPLSHAYERT
GGYYLIFSCGAAIYLAESIETISLNMSEARPTIIFTVPRLFDRIKMGILKQISSQSAIKQ
KIFYWALKTGEKYHQEINEKGVAGKLLSAKHALAEKLVYKKIKNKFGGRLRYFVSGGAAL
PQKIGEFFQALDISILEGFGLTETSPVTHVNRPEKIKYGTVGPAVENVQVMIAEDGEILL
KGPNIMKGYWNDEAATREVIRDGWFHTGDIGVIDRDGYLKITDRKKHIIVTSGGKNIAPM
PIENLISDSSYVDQVIVIGEKRPFLIALIVPEFNKLKEFAAAEGIQAASNKELIENKSVQ
QIFEKLLRTVSRQLATHEKVRKFLLVETAFTIESGHMTPTMKLKRKEISARYASEIDKVY
NALNMVYNSE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgggacttatcaatcctggcttccagacactgcccgagcttttcacttcggtttttaac
cattaccggggacaaagttcaaaattcccgttcgcaaggaaaatcaatggtgtatatgaa
cccatctcatatagtgcttttgaaaaagatgtcaactcatttgctgcgtttctgaaacag
aacggcatcaaggcaaaagagcgggtcgccattctttcagaaaacaggcctggatggtac
ctgtctgatatggctatcctgaacatcggggcaatcaatgtgccgctctacccctccctg
ccagccaatcagattgaatacatccttagtaactgcagcgcgaagggcattattgtctca
aacatgcttcagctcggcaaaatcctttcgatttggcaaaatcttccggaattgactctt
gtggtggttatgaaccgcctcgaagagaccatcgaagatgttctcgatctgaatcaggcc
aaagcaaggggtgaaaaaattcttgcagaaaaaccctggtgccttgagggcgtacctgtc
gaacctgacgatgttgcaacgatcatctatacatcaggtacaacagggcttccgaaagga
gtcatgcttacgcatcgtaacatttgtgaaaacgtcaagtcctgctcctccatcatgcgt
cttgatgaatccgactgcagcctctctttcctgccactctcccatgcctatgaacgaacc
gggggttattacctgattttttcctgcggagcagctatttacctggctgagagtattgaa
acgatttcactgaacatgagtgaagcccgtccgaccatcatctttaccgttccgagactg
ttcgaccgcatcaagatgggcatactcaaacagatttcctctcaaagtgccataaagcag
aaaatattctattgggcgctgaaaacgggggaaaagtaccaccaggaaatcaatgaaaaa
ggagttgccggaaaactgctttccgcgaagcacgccttagcagaaaaactggtctataaa
aaaatcaaaaataagtttggcggaaggttgcgttattttgtctccgggggagctgccctc
cctcaaaagatcggtgaattttttcaggcacttgatatcagtattctggaaggatttggc
cttacggagacctctccggtaacccatgtcaatcgcccggaaaaaatcaagtatggcacg
gtaggcccggcagttgaaaacgttcaggttatgattgccgaggatggcgaaattctgctc
aaaggcccaaatatcatgaaaggatactggaatgatgaggctgccacccgggaggttatc
agagatggctggttccatacaggcgacatcggagtgatcgaccgtgacggttatctgaaa
ataaccgatcgtaaaaagcatatcatcgtcacctctggcggcaaaaatattgcccccatg
cctatcgaaaatcttatttccgatagctcttacgttgatcaggttattgtgattggcgaa
aaaaggccatttctcatagcccttattgttcccgaattcaataaactgaaggagtttgct
gccgcagagggaattcaggctgcgagtaacaaagagttgattgaaaacaagagtgttcag
caaatttttgaaaaattgctccgcacggtttcacgacagcttgccactcatgaaaaggta
cgcaagttcctgcttgtggaaaccgcattcaccattgagagcggtcatatgactccgacg
atgaaactcaagcgcaaggagatcagtgcaaggtacgcctctgaaatagacaaggtttac
aatgcgctcaatatggtctacaactcagaatag
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