KEGG   Pelodictyon phaeoclathratiforme: Ppha_1493
Entry
Ppha_1493         CDS       T00731                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pph  Pelodictyon phaeoclathratiforme
Pathway
pph02024  Quorum sensing
pph03060  Protein export
pph03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pph00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Ppha_1493
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Ppha_1493
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Ppha_1493
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pph02044]
    Ppha_1493
Enzymes [BR:pph01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Ppha_1493
Secretion system [BR:pph02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Ppha_1493
  Eukaryotic Sec-SRP protein
   Ppha_1493
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW AAA_22 Zeta_toxin CbiA AAA_18 AAA_17 CLP1_P AAA_33 nSTAND3 ATPase ATP_bind_1 AAA_30 NTPase_1 MMR_HSR1 APS_kinase ParA KAP_NTPase AAA_24 NACHT DUF463 DO-GTPase1 ResIII AAA_28 ArsA_ATPase Thymidylate_kin AAA_25 AAA_16 KR AAA_31 MeaB SLFN-g3_helicase PRK MobB Glyoxalase_2 CT_C_D
Other DBs
NCBI-ProteinID: ACF43743
UniProt: B4SA47
LinkDB
Position
complement(1572440..1573789)
AA seq 449 aa
MFDSLSDKLEATFKKLAGQATINEINIGLAMRDIKRALLGADVNYKVAKKLIDDIREKSL
GEQVIKSVSPAQMIVKIVYDELTELMGGEQKPLNLSPKKLPAVIMVAGLQGSGKTTFCAK
LALRLKKSGKQPMLVAADVYRPAAIDQLKALGQQVDVPVFAIEEQDAMKAALQGLEAARS
AAKDVVIVDTAGRLQIDQVMMAEAESLKHALKPDELLFVVDSMMGQEAVNTAKAFNDRLD
FDGVVLTKLDGDSRGGAALSIRQVVEKPIKFISIGEKVDDLDLFYPDRMAQRILGMGDIV
SFVEKAQENLDLEKSLEMQKKLMKNEFDLNDFFDQLQQLKKMGSIQGLIEMVPGLNKMVP
KQDLENLDFKPIEAMINSMTKQEKMTPDIINGSRRQRIARGSGTKVQEVNLLLKQFGEMK
KMMRSVSKLSQSGRKITSQNLALDKFLKR
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgttcgatagtttaagtgataaattagaggccacctttaaaaaacttgcgggtcaggcc
accattaacgagattaacattggtctcgccatgcgcgatatcaagcgagctcttcttggt
gctgacgtcaattacaaggttgcaaagaaattaattgatgatataagagagaaatctctt
ggcgaacaggtcatcaaaagcgtttcccctgcgcagatgatcgtcaaaatcgtttatgac
gagctgacggagctgatgggtggagagcagaagcccttgaacctttctccaaaaaaactg
cctgcggttatcatggttgccggtttgcagggttccgggaagaccactttctgcgccaaa
ctggcattacgtttaaaaaagagcggcaaacagccgatgctcgttgcggctgatgtttat
cgtcctgcggcaattgatcagcttaaagcactcggtcagcaggtggatgtccctgttttt
gccattgaagagcaggatgccatgaaagcagcgcttcaaggattggaggccgcccgctct
gctgcgaaagatgttgttattgtcgatactgctggtcgtttgcagattgatcaagtcatg
atggcagaggctgagtccttgaagcatgcactcaaacctgacgagcttctcttcgttgtt
gactccatgatgggccaggaagcggtcaatacggccaaggcatttaatgatcgccttgat
tttgacggcgtagtactgaccaagcttgatggcgactcaaggggtggtgcggcgctatcc
atccggcaggttgttgaaaagccgattaaatttatcagcatcggagaaaaggttgacgac
cttgacctcttctaccccgatcgtatggcccagagaattttgggaatgggtgatatcgtc
agttttgttgaaaaagcacaggaaaacctcgatcttgagaagagtcttgagatgcagaaa
aagttgatgaagaacgagtttgatctcaacgactttttcgaccaattgcagcagctcaag
aaaatgggatcaattcagggattgattgaaatggtgccaggtctgaacaagatggttccc
aaacaggatcttgaaaatcttgacttcaaaccaattgaggccatgatcaattccatgaca
aagcaggaaaagatgactcccgatatcattaacggcagtcgtcggcaacgtattgcacga
ggcagcggaacaaaggttcaggaggtcaaccttctgttgaagcaattcggggagatgaag
aagatgatgcgttcggtatcaaagctctctcagtccggcagaaaaattacttcgcagaat
cttgcgcttgacaagtttttaaaacgatag

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