Pelodictyon phaeoclathratiforme: Ppha_1523
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Entry
Ppha_1523 CDS
T00731
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pph
Pelodictyon phaeoclathratiforme
Brite
KEGG Orthology (KO) [BR:
pph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pph03016
]
Ppha_1523
Enzymes [BR:
pph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Ppha_1523
Transfer RNA biogenesis [BR:
pph03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ppha_1523
Prokaryotic type
Ppha_1523
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ACF43772
UniProt:
B4SA76
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All DBs
Position
complement(1606058..1606789)
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AA seq
243 aa
AA seq
DB search
MKNIRVTVEYDGTSFAGWQRQSGAIVTVQGEIEVALGKILQEKISLAAAGRTDKGVHARA
QTANFFTASSLEPSRIVHSLNSLLPQTIRISNPEEVDADFHARHSAKERQYRYFLIEEPS
AIYGRFAGCSFGKLDVAIMQQMAAILVGTHDFSAFSKEDRDNPGRICSVTACKWYPCKHY
LVLRISADRFLRSMVRYLVDAMIRAGKGRLSVGDFCRMLETGVTTSQLNPALPAGLFLWD
VLY
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacataagggttactgttgaatatgacggaacctcgtttgccggctggcagcgg
cagtcgggtgctattgttaccgttcagggggagattgaagtcgcacttggtaaaattttg
caggaaaagatctctcttgctgcagcagggagaacggataagggggttcacgccagggct
cagacggcaaacttttttacagcatcatctctggagccatcccggattgtgcattcactg
aactcgcttctgcctcaaacaatcaggataagcaatcccgaagaggttgatgctgatttt
catgcaaggcatagtgccaaagaaaggcaataccgctatttccttatcgaggagccttcg
gcgatttatgggcggtttgcgggctgttcgttcggtaagcttgatgtagcgattatgcag
caaatggcagccatcctggtcggtactcatgatttctcggctttttcaaaggaagacaga
gataacccgggtcggatatgtagcgtaacggcttgcaaatggtacccctgcaaacattac
cttgttctacggatttcagcggatcgctttttgcgaagtatggtgcgctatctggtggat
gccatgatacgtgcaggaaaggggaggctttcggttggggacttctgtcggatgcttgaa
accggggtcacgaccagtcagcttaatccagcattgccggcaggtctttttctctgggac
gtactctactga
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