Pelodictyon phaeoclathratiforme: Ppha_1568
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Entry
Ppha_1568 CDS
T00731
Name
(GenBank) Oxaloacetate decarboxylase
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
pph
Pelodictyon phaeoclathratiforme
Pathway
pph00020
Citrate cycle (TCA cycle)
pph00620
Pyruvate metabolism
pph00720
Other carbon fixation pathways
pph01100
Metabolic pathways
pph01120
Microbial metabolism in diverse environments
pph01200
Carbon metabolism
pph01230
Biosynthesis of amino acids
Module
pph_M00173
Reductive citrate cycle (Arnon-Buchanan cycle)
pph_M00614
Anoxygenic photosynthesis in green sulfur bacteria
Brite
KEGG Orthology (KO) [BR:
pph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ppha_1568
00620 Pyruvate metabolism
Ppha_1568
09102 Energy metabolism
00720 Other carbon fixation pathways
Ppha_1568
Enzymes [BR:
pph01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
Ppha_1568
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Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
Biotin_lipoyl
HMGL-like
GCV_H
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ACF43812
UniProt:
B4SAC6
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All DBs
Position
complement(1658015..1659940)
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AA seq
641 aa
AA seq
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MKKIRFMDVSFRDGFQSCFGARVKTEDFLPALEAAVHAGTDNFEIGGGARFQSLYFYCEE
DAFTMMDEARKVVGPDINLQTLSRGANVVGLVSQSRDIIDLHARLFKKHGITTIRNFDAL
MDVRNLSYSGQCIHDAGLRHQVVVAMMGLPPGLQESYCHTPQFYLDKLREILDAEIPFDS
VAFKDASGTTTPAIVHETIKGARKMLPEGTEIQFHTHDTAGMGVACNYAAITGGADIIDL
SMAPVSGGTAEVDILTMWQRLRGTEYTLDIDQEKYLEVEALFIDQMYKYYMPPEATAVNP
VISFSPMPGGALTANTQMMRDNNTLHLFPAVINNMREVVVKGGFGASVTPVSQFYFQQAF
ANTIQGHWKKITDGYGKMVLGYFGKTPARPDDEVVRLASEQLGLPPTVEDVHDINDRNPE
LGVAYNKSLLHEANIPQTDENIFIAATCGAKGIAFLQGDCSTGIRYKADIAVEIKATPRA
EVVAAYHEAHKHDIHQEEVNHRLKDLFSKLPPAAPVAPPGASKVISMAGNFTVFVDGAPF
TVSFAEGSAINPQTVALPSAEGSPEAHHPHPGTPVPAVMPGNVFSIAVKLGDEVREGEEV
AIIEAMKMENSVKAPCGGRILSITVAKGDSVGMGETMMTIG
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcagatttatggatgtctcattccgtgacgggtttcagtcctgttttggt
gcgagagtaaagaccgaggactttttgcctgcccttgaagctgccgttcatgccggtaca
gacaattttgaaattggcggtggagcccgctttcagagcctctatttctattgcgaagag
gatgcttttaccatgatggatgaagcccgcaaggttgtggggccggatatcaacctgcag
accctttcacgaggagccaacgtcgttggccttgtttcgcagtcacgcgatattattgat
ctccatgcccgtctcttcaaaaagcatggtatcaccaccatccggaatttcgacgccctg
atggatgtccgcaatctctcctactccggtcagtgcattcacgatgcagggcttcgccac
caggtcgttgttgccatgatgggccttccacccggattgcaagagagctattgccatacc
ccgcagttctatctcgacaagctgcgggagatacttgatgccgaaattccattcgacagc
gttgctttcaaggatgcttcaggcacaacaactccggctattgttcatgaaaccatcaag
ggagcacggaagatgctgcccgaaggcaccgaaatccagttccatacccacgacacggca
gggatgggcgtagcctgcaactatgccgccatcaccggtggagctgacattattgatctc
tccatggctccggtcagtggaggaaccgccgaagtggatatcctcaccatgtggcagagg
ctcagaggcaccgaatacaccctcgacatagaccaggagaaatatcttgaggtggaggcg
ctctttattgatcagatgtacaagtactacatgccccctgaagccacagcggtcaatccg
gtcatctccttctcacccatgcccggcggagccctcacggcaaatacccagatgatgcgc
gacaataacacgctgcacctcttccccgcagtaatcaacaacatgcgtgaggtggtggtc
aaaggaggctttggcgcatcggtcaccccggtttcacaattctatttccagcaggctttt
gccaacaccattcagggccactggaaaaagatcaccgacggttatggcaaaatggtgctc
ggctacttcggcaagacccctgcccgccctgacgatgaggttgtcaggctcgcatccgaa
cagctcggtcttcctccaacggttgaagatgtgcacgatatcaacgatcgcaatccggaa
cttggcgtagcctataataaatcgctgctccatgaagccaacattccgcagaccgacgaa
aacatctttatcgcagcaacctgcggcgccaaaggtatcgcttttcttcagggagattgc
tcaaccggtattcgctacaaggccgatattgccgttgaaatcaaggcaacaccaagagca
gaggtggttgcggcctaccatgaggcacacaaacacgatattcaccaggaagaggtgaac
catcggcttaaggatctcttttccaaactgccacctgcagcgccggttgcgcctccggga
gcatcaaaggtgatctcaatggcaggcaactttaccgtttttgttgatggagcccccttc
accgtctcctttgccgaaggctccgccatcaatccccaaacggttgccctgccatcagcg
gaaggctctcctgaagcccaccacccgcatccagggacaccagtgccggcggttatgccc
ggcaacgtcttctcgattgccgtcaagcttggtgatgaggtcagggagggagaagaggtc
gccatcatcgaagccatgaaaatggaaaactccgtcaaagccccctgtggcggaagaatc
ctctccatcacggtagccaaaggcgactccgtcggaatgggagagaccatgatgaccatc
ggatag
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