Pelodictyon phaeoclathratiforme: Ppha_1810
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Entry
Ppha_1810 CDS
T00731
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pph
Pelodictyon phaeoclathratiforme
Pathway
pph04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Ppha_1810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pph03019
]
Ppha_1810
03009 Ribosome biogenesis [BR:
pph03009
]
Ppha_1810
04131 Membrane trafficking [BR:
pph04131
]
Ppha_1810
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pph04147
]
Ppha_1810
Messenger RNA biogenesis [BR:
pph03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Ppha_1810
Ribosome biogenesis [BR:
pph03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Ppha_1810
Membrane trafficking [BR:
pph04131
]
SNARE
SNARE associated proteins
Others
Ppha_1810
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Ppha_1810
Exosome [BR:
pph04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ppha_1810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_14
AAA_22
AAA_5
AAA_2
AAA_33
TIP49
AAA_28
IstB_IS21
TsaE
AAA_18
NPHP3_N
RNA_helicase
Zeta_toxin
AAA_24
nSTAND3
AAA_25
AFG1_ATPase
Parvo_NS1
nSTAND_NTPase5
DUF815
NACHT
AAA_19
AAA_7
ATPase_2
Mg_chelatase
AAA_lid_PRS2_C
PhoH
bpMoxR
Sigma54_activ_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACF44042
UniProt:
B4SBI8
LinkDB
All DBs
Position
complement(1914481..1916628)
Genome browser
AA seq
715 aa
AA seq
DB search
MSNTELVLKVKEAIVKDVGRAIARIDPNDMVHAGLESGDIVLIEGKRSTPVKILPSYPND
RDKGIIQIDGITRENAIVGIDEKVLIHKTTIRKATKIKLKPVTKSSSLIKADDAKYIGSL
INGLPVSNGDKIKATLFGSGSIYYTISSTVPDGVVLIHPDTSIQLESSKQNEVKSNKITY
EDIGGLGNQVQRIREMIELPLKYPEIFERLGVEPPKGVFLYGPPGTGKTLIVRAVAQETD
AYFINISGPEIMGKYYGESEARVRNIFAEAQSHAPSIIFIDEIDAIAPKREDMGGEKQVE
KRVVAQLLSLMDGLESRGKVIVIGATNIPNSIDPALRRPGRFDREISISIPDKKGRLEIL
HIHTRGIPLSEDVDMSKIADITHGFVGADLEALAREAAMTALRKILPRINFELSEIPYEL
LMQLEVTMDNFLDAMKEVEPSAIREVFVEVPDVKWEDVGGLDEIKQALKETVEWPLKYAE
LFKKTDTNPPKGIILYGKPGTGKTYLAKALASESGVNFISVKGPQILNRFIGESEKGVRE
LFRLAKQSAPTILFLDEIDSLAPRRRNDGVESGVIDRVISQFLTEMDGIEELKGVTVLAA
TNRIDRIDPALLRSGRFDLMFEVPLPDLSTREMIFKIHTKNMPLKESVSLNALAEKTDNM
TGADIQFICQKAKMVAIRELIDKKVDSETIEIIITEEHFEHAIQVVSNQATNRQN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatactgagttggtcttaaaagtcaaagaggcaattgttaaggatgtagggcgt
gcaattgcgagaattgatccgaatgatatggttcatgctggtttggaatcgggtgatatt
gtccttattgagggaaaacgctccactccagttaaaatacttccttcttaccctaatgat
cgagataagggaatcatacagattgatggaatcactcgagaaaatgccattgttggaata
gacgaaaaagttctaatacataaaacaacaatacgcaaggcaacaaaaataaaactcaag
ccggtaacaaaatcaagctctttgattaaggctgatgatgcgaaatatattggttctctt
ataaatggtttaccggtttctaatggtgataaaattaaggcgacattatttggttccgga
tcgatatattatacgatttcatcgaccgtacctgatggagttgttttgatacatcctgat
acatcaatacaacttgaatcttcaaaacaaaatgaagtaaaatcaaacaagattacatac
gaagatataggtggacttggtaatcaagttcagcgaatacgtgaaatgattgaattaccc
ctaaaatatcctgaaatatttgaaaggttaggagtcgaaccaccaaaaggtgtttttttg
tatggacctccaggtacaggaaagacgcttattgtgagagccgtcgcacaagagaccgat
gcttattttataaatatatccggccctgaaattatgggcaagtattacggcgaaagcgaa
gcaagagtacgtaatatatttgctgaggcccagtctcatgcgccgtctataatatttatt
gatgaaatagatgcaatcgctccaaaacgggaggatatgggtggcgaaaagcaggttgag
aaaagggttgtagctcagcttttatccttgatggacggtttggagtcaaggggcaaagtt
attgtgattggagcaacaaatattccaaattctattgatcccgcgcttagaaggccagga
cgtttcgatcgtgagatatcaatttctattcctgataaaaagggacgacttgaaatactt
catatccacacaaggggtattcccttgtcagaagatgtggatatgtcaaagattgctgat
attacccatggttttgttggagctgatcttgaagctcttgctcgcgaagcggctatgaca
gcgttaaggaaaattcttccaaggattaactttgaattatcagaaataccatacgagcta
ttaatgcagttagaagttacgatggataattttcttgatgcgatgaaagaggtcgaacct
tctgctatccgtgaagtatttgttgaggttcctgatgtcaagtgggaagatgttgggggg
cttgatgagattaagcaggcattgaaagagaccgtagagtggcctctaaaatatgctgaa
ctatttaaaaaaacagataccaatcctccaaagggtataatattatatggtaagcctggc
acaggaaaaacataccttgctaaagcgcttgccagtgagagtggagtaaactttatttct
gtaaaaggtcctcaaatacttaaccgttttattggagaatctgaaaaaggggtaagagaa
cttttcaggcttgcgaaacaatcagcgcccacaattctctttcttgatgaaatagatagt
cttgctccacgaagaaggaatgatggcgtagaatcaggagttattgacagagtaatcagt
caatttctcacagaaatggatggtattgaggagttaaaaggggtcactgtgcttgctgca
acaaatagaattgatcgtattgatcccgctttattacgatcaggaagatttgatctcatg
tttgaagttccattaccggatttatcaacaagagagatgatttttaaaatacatactaaa
aatatgcctctaaaagagagtgttagtctaaatgcacttgccgaaaaaaccgataatatg
actggcgcagatatacagtttatatgtcaaaaggctaaaatggttgctattcgtgaactg
attgataaaaaagtcgattcagaaactatagaaataattataacagaagagcattttgaa
catgcgatacaagtagtcagcaatcaggcaacaaatagacaaaattaa
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