Pelodictyon phaeoclathratiforme: Ppha_2917
Help
Entry
Ppha_2917 CDS
T00731
Name
(GenBank) SEFIR domain protein
Organism
pph
Pelodictyon phaeoclathratiforme
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
TPR_8
TPR_1
TPR_2
CHAT
TIR_2
TPR_NPHP3
TPR_7
TPR_9
TPR_11
AAA_16
TIR
ThsB_TIR
SEFIR
CAP12-PCTIR_TIR
NACHT
MeaB
AAA_22
NB-ARC
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ACF45059
UniProt:
B4SHG6
LinkDB
All DBs
Position
complement(3007830..3012665)
Genome browser
AA seq
1611 aa
AA seq
DB search
MKVFISHSSEDKPQVELLAHLLREHGFEPWLDKWEIGPGDDIVASINAGLDAAHAGIIVF
SSHTRSSRWVEAEVSYLTYSRIEEGKLLIPVVVGDGAWVPPLLRPLARRGIDQIDAIIDA
LRYRQALPSPIRHPEHGGIELVSISLRETSGENGNHGITVEVRIGDDVHGTASHPTIPKA
LFQARSNFLTCHVTGLGRNPVAAERAAQESSLVDLGRQLRAFCLPESSGQALADLLDGSP
VGTLVEVRVEASGSALLSLPYDALRLPDDRLLATHPACILLRRPPDLKGTASPALAGPLK
ILVAVGAPDEGTTSSAVLDYEREVQNILDAVEPLQRHENVEVHILEVGHPDEIARAIERD
AYHVLHLSCHGRPGMLELEDEEGQAVSVTADELIVPLREKGRPLPLVFLNTCHGAVQDGH
TVSLAEALLQSGVPAILAMQTSVSDQYASRLARSFYQHLADGEHLLASRALAQARKELER
ERLAAIERNEPLDATQPEYATAALFIRGDERPLANFALNNDPLKLQPVHDAAGAVPQLLI
GDLIGRRKELRETLRTLRAESGAFSGVVLTGIGGIGKSALAGRAMQRLRQDGYLVPVHAG
RFDLSGIVTALRDELIACNPPWANRILAQFDHPGIDDRDRLRLVARVLDEQRVVLLLDDF
EQNLHPGGDAFLNPDIAVSMQFLAEHAQRGRLLITCRNPVPEMSLFLRHIPVGALSPAET
RKLALRLDALNRSDSATGLEPEQRRRILRILGGHPRSLEFINTLLGGQQRRLRHMMKRLD
TLLKEVGLAPGSTFGDADQALQHTLSIAARDIMLDELLETAREERIEQVLLQVAVSNLPV
TPTGVARMLASDDAAVPGDVAAADRALVRLHNMALLHLDPDDRSAWVHRWTAEGLEQLDP
ANHAERCLRAGRYRMWRVQNESHSLDDLVEAVRNFLSGADYDRASELANACLAFLSRNQR
SLDVAAFASEVLETLPIEHSGFGSIADQEAQAHLAFGQTGTAFRRYETLVARYERLAQSE
PDRADYQRDLSVSYNKMGDLYRALGQGEQARDAFLKALEIAKRLAQSEPDRADYQRDLSV
SYNKMGDLYRALGQGEQARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYNKMGDLYRAL
GQGEQARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYERMGDLYRALGQGEQARDAFLK
ALEIAKRLAQSEPDRADYQRDLSVSYERMGDLYSALGQGEQARDAFLKDLEIAKRLAQSE
PDRADYQRDLSVSYNKMGDLYRALGQGEQARDAFLKALDIRQRLAQSEPDRADYQRDLSV
SYNKMGDLYSALGQGEQARDAFLKDLEIAKRLAQSEPDRADYQRDLSVSYNKMGDLYRAL
GQGEQARDAFLKALDIRQRLAQSEPDRADYQRDLSVSYNKMGDLYSALGQGEQARDAFLK
ALEIAKRLAQSEPDRADYQRDLSVSYERMGDLYRALGQGEQARDAFLKALEIAKRLAQSE
PDRADYQRDLSVSYNKMGDLYSALGQGEQARDAFLKALDIRQRLAQSEPDRADYQRDLAV
SLVLFAKAHDSAEKEHLKRALSILESLNATGRLAPVDEPMITAIQNMISGA
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtattcatcagccactcttctgaggacaagccgcaggttgagctgttagcccac
ctattacgagaacacggattcgaaccgtggctggacaagtgggagatcggccccggcgat
gatattgtcgcaagcatcaacgccggtctggatgctgcacatgcgggaatcatcgttttc
tcgtcacacacaagatcgagccgctgggtggaggcagaggtcagctatctgacctactcg
cggatagaggaagggaagctgctcattccggtagtcgtcggcgacggtgcatgggttcct
ccgcttcttcgtcccctggcacgccggggtatcgaccagatcgacgcgatcatcgatgcg
ctgcgctaccgccaggccttaccatcgccgattcggcatccggagcatggagggatcgag
ctggtctcgatttcgctccgggaaacgtcgggtgagaacgggaaccatgggatcacggtc
gaggtgcgtatcggtgacgatgtccacggaacagcctctcatccaacaatcccgaaagcc
ttgttccaggcccggagcaactttctgacctgccatgtcactggcttggggcgcaatccc
gtcgctgcggaacgggcggcgcaggaatcaagcctcgtggatcttggccgacagttgcgg
gcattctgcttaccggaatcctcagggcaggctctggccgatcttctcgacggaagtccg
gttggaacgctggtcgaggttcgggtggaagcttcgggatccgcattgctcagcttgccc
tacgatgcgctgcgcctgcccgatgatcgcctgttggctacccatcccgcctgcatcctg
ctgcgacgaccacctgatctgaaaggtaccgcaagcccggcattggcagggccgctgaag
attctcgttgcggtcggagcccctgacgagggaacaacctcctccgcagtgctcgattat
gaacgtgaggtacagaacatcctcgatgctgtggaaccgctgcagcggcatgaaaatgtc
gaggtgcatattcttgaggttggccatccggacgagatcgccagggcgattgagcgcgat
gcctaccatgtgctccatctttcctgccacggccgtccgggaatgctggaactggaagat
gaagaggggcaagccgtctcggtcacagcagacgaactgatcgttccgctcagggaaaag
ggaagaccgctccctcttgttttcctcaatacctgccacggagccgttcaggatggccac
acagttagcctggctgaagccttgctgcagtcgggagtgccggcaatactggccatgcag
acctcagtcagtgatcaatacgcaagccgtctcgcccgatcattttaccaacatctggca
gatggcgagcatctgcttgcgagtcgggcgctcgcgcaagcccgcaaagagcttgagcgt
gagcggcttgccgctatcgagcggaacgaaccacttgatgcgacccaacccgagtacgca
actgcagcacttttcataaggggtgacgaacggccgctggcaaacttcgctctcaacaat
gatcccctcaagctccagccggtgcacgacgcggctggagccgtaccgcaactgctcatc
ggtgatctgattggtcggcgcaaggagctgagggagacactgcgcactctgcgtgcagaa
tccggagccttctccggtgtggtgctgaccggaatcggggggatcggcaagagcgctttg
gcaggacgtgccatgcaacgccttcgtcaggatggctatctcgttccggttcacgccggg
cgtttcgatctctccggtattgtcacggcattgcgtgatgagcttattgcctgtaatcca
ccctgggcaaatcgtatactcgctcagttcgaccaccccggtatcgatgaccgcgatcgc
ctgcggctcgtcgcgcgagttctcgatgaacagcgtgtggtgctgctcctcgatgacttc
gagcagaacctgcatccgggcggtgatgcttttctcaaccccgacatcgcagtcagtatg
caattcctggctgaacatgcccaacgcggacgactgcttatcacctgccggaatccggtt
ccggagatgagtttatttctccggcacattcctgtcggtgcactcagtccggccgaaacc
cgcaaactggcactacgcctcgacgcgctcaaccgctcggactctgcgacgggtctggag
ccggagcaacggcgcaggatactgcgcatactcggcgggcacccgcgttcccttgagttt
atcaataccctgttgggtggtcagcagcggcgtttgcgtcacatgatgaagcggctcgat
accctgctgaaagaggtcggccttgctccaggcagcaccttcggtgacgcagatcaggct
cttcagcacaccctgtcgatagcggcacgcgatatcatgctcgacgagttacttgagacc
gcacgtgaagagcggatcgaacaggtgctgcttcaggtcgcggtgtcgaacctgccggtc
acaccaactggcgtcgcgagaatgctggcaagcgatgatgctgccgttcccggtgacgtt
gctgccgctgatcgagcgctggttcgcctgcacaacatggcactccttcaccttgatcct
gatgaccgctctgcctgggtgcatcggtggacggcggaggggttggaacagcttgacccg
gccaatcacgcagaacgttgcctccgggcaggtcgctaccggatgtggcgggtgcaaaac
gagagccacagtctggacgatctggtggaggcggtgcgcaacttcctctccggcgctgac
tacgaccgagcttcggaactcgcgaacgcttgcctggcgtttctgagccggaaccaacgc
tccctcgatgttgctgcatttgcctccgaggtactggaaaccctgcccatagagcattcc
gggttcggttcaattgccgatcaagaggcgcaagcgcaccttgcgttcggacagaccggc
acagcattccggcgatacgaaacacttgttgcacgctacgagcgtcttgcgcagtccgag
ccggatcgtgccgactaccagcgcgacctctccgtgtcgtacaacaagatgggtgacctg
taccgcgctctgggtcagggtgagcaagcgcgcgatgcctttctgaaggcgcttgaaata
gccaagcgtcttgcgcagtccgagccggatcgtgccgactaccagcgcgacctctccgtg
tcgtacaacaagatgggtgacctgtaccgcgctctgggtcagggtgagcaagcgcgcgat
gcctttctgaaggcgcttgaaatagccaagcgtcttgcgcagtccgagccggatcgtgcc
gactaccagcgcgacctctccgtgtcgtacaacaagatgggtgacctgtaccgcgcactg
ggtcagggtgagcaagcgcgcgatgcctttctgaaggcgcttgaaatagccaagcgtctt
gcgcagtccgagccggatcgtgccgactaccagcgcgacctctccgtgtcgtatgagcga
atgggtgacctgtaccgcgcactgggtcagggtgagcaagcgcgcgatgcctttctgaag
gcgcttgaaatagccaagcgtcttgcgcagtccgagccggatcgtgccgactaccagcgc
gacctctccgtgtcgtatgagcgaatgggtgacctgtacagcgctctgggtcagggtgag
caagcgcgcgatgcctttctgaaggatcttgaaatagccaagcgtcttgcgcagtccgag
ccggatcgtgccgactaccagcgcgacctctccgtgtcgtacaacaagatgggtgacctg
taccgcgctctgggtcagggtgagcaagcgcgcgatgcctttctgaaggcgctcgacatc
cggcagcgtcttgcgcagtccgagccggatcgtgccgactaccagcgcgacctctccgtg
tcgtacaacaagatgggtgacctgtacagcgctctgggtcagggtgagcaagcgcgcgat
gcctttctgaaggatcttgaaatagccaagcgtcttgcgcagtccgagccggatcgtgcc
gactaccagcgcgacctctccgtgtcgtacaacaagatgggtgacctgtaccgcgctctg
ggtcagggtgagcaagcgcgcgatgcctttctgaaggcgctcgacatccggcagcgtctt
gcgcagtccgagccggatcgtgccgactaccagcgcgacctctccgtgtcgtacaacaag
atgggtgacctgtacagcgctctgggtcagggtgagcaagcgcgcgatgcctttctgaag
gcgcttgaaatagccaagcgtcttgcgcagtccgagccggatcgtgccgactaccagcgc
gacctctccgtgtcgtatgagcgaatgggtgacctgtaccgcgctctgggtcagggtgag
caagcgcgcgatgcctttctgaaggcgcttgaaatagccaagcgtcttgcgcagtccgag
ccggatcgtgccgactaccagcgcgacctctccgtgtcgtacaacaagatgggtgacctg
tacagtgctctgggtcagggtgagcaagcgcgcgatgcctttctgaaggcgctcgacatc
cggcagcgtcttgcgcagtccgagccggatcgtgccgactaccagcgcgacctcgcagta
tctctcgtcctctttgcaaaggcacatgattctgctgaaaaagagcatctgaaacgtgct
ttgtcgattctcgagtcactgaatgcgacaggtcgattggctcctgtagacgaaccaatg
attactgccatccaaaacatgatctcaggggcgtga
DBGET
integrated database retrieval system
