Halopseudomonas phragmitis: BVH74_01570
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Entry
BVH74_01570 CDS
T07765
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppha
Halopseudomonas phragmitis
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppha03400
]
BVH74_01570
Enzymes [BR:
ppha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BVH74_01570
DNA repair and recombination proteins [BR:
ppha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BVH74_01570
Prokaryotic type
BVH74_01570
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AQZ93534
UniProt:
A0A1V0B186
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All DBs
Position
346240..347667
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AA seq
475 aa
AA seq
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MNAIQLCWLRNDLRCTDNQALWHASQQGPVVAVWLISGDTWKAHDDAPVKIDFWLRNLRE
LGLSLATLNIPLRIIDVGTWSHCAEALLELASQLNAQGLFFNDEYGIHEQARDAEVERKF
QHAGLDCRRFTDQLLFAPTSLKTQAGTPFKVFSQFRRQAYAQLHSHLPACLPAPQRQSAL
PLTSDTPPAQLDDFPAASPLQQQLWPAGEAAAQQRLEQFCHDALMDYHATRDRPDLQGTS
QLSPYLVSGILSVRQCLHAALRVNQGEFASGSPGAVAWINELLWREFYKYILVNFPRVSR
HRAFRPATEAIPWRNDPAALEAWQQGRTGFPIIDAAMRQLATTGWMHNRLRMLCAMFLSK
NLLLDWRSGERWFMRQLIDGDLAANNGGWQWSASTGTDAAPYFRLFNPISQARKFDPQGD
FIRQWVSELANTPTVSIHAPQPDSLLKDNDYPAPIIDLASSRERALTAFRELATP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccattcagctgtgctggctgcgcaacgacctgcgctgcaccgataaccaggca
ctctggcacgccagccagcaaggcccggtggtggcggtctggctgatcagcggcgacacc
tggaaagcccatgacgacgcaccggtcaagatcgacttctggttgcgcaacctcagggag
ctgggcctgagtctggccaccctgaatatcccgctgcgcatcattgatgtcggcacctgg
agccattgcgccgaagcgctgcttgagctggccagccagctcaatgcccaaggcctgttc
ttcaatgacgaatacggaatccacgaacaggcccgcgatgccgaagtcgaacgcaagttt
cagcacgcagggctagattgccggcgcttcaccgaccagttgctgtttgctccgaccagc
ctgaagacccaggccggcaccccgttcaaggtcttcagtcagtttcgccgccaggcctat
gcccaactgcacagccaccttccagcctgcctgccggcgccgcagcgccagagtgcgctg
ccgctgaccagcgacacgccaccagcccaactggatgacttccctgcggccagccccttg
cagcaacagctctggccagccggcgaggcagcggcccagcagcggcttgagcagttctgt
catgacgcgttgatggactatcacgcaacccgcgaccggcctgacctgcaaggcaccagc
cagctgtcaccctatctggtcagcggcatattatccgtgcgccaatgcctgcacgcagcc
ttgcgggtcaatcagggcgaattcgccagcggctcgcccggtgccgtggcctggatcaac
gaactgctgtggcgcgagttctataaatacatcctggttaacttccctcgggtatcgcgc
caccgggcctttcgcccggccaccgaagccatcccctggcgcaatgatccggccgccctg
gaggcctggcaacaaggccgcaccggcttcccgataatcgatgcagccatgcgtcaactg
gcgaccaccggctggatgcacaaccggctacggatgctctgcgccatgtttctgagcaag
aacctgctgcttgactggcgcagcggtgagcgctggttcatgcgtcagttgatcgacggt
gatctggcagccaacaacggcggctggcagtggagcgcctccaccggtactgatgccgcg
ccctacttccggctattcaacccgatcagccaggcccgcaagttcgatccccagggagat
ttcatccgccagtgggtcagcgagctggccaacaccccaaccgtcagcatccatgcgccg
cagcccgacagcctgttgaaagacaacgactacccggcgccgatcattgatctggccagc
agccgtgaacgcgcgctgaccgccttccgggagctcgctaccccatga
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