Halopseudomonas phragmitis: BVH74_02010
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Entry
BVH74_02010 CDS
T07765
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ppha
Halopseudomonas phragmitis
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppha03016
]
BVH74_02010
Enzymes [BR:
ppha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BVH74_02010
Transfer RNA biogenesis [BR:
ppha03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BVH74_02010
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AQZ93607
UniProt:
A0A1V0B0Y2
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All DBs
Position
complement(441789..442328)
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AA seq
179 aa
AA seq
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MPRLFIALELPEPVKQALLQLAEPMPGARWQSAEQLHLTLRFVGEVAAGQVEQVIAALTS
LRFRDFTLTVKGMGWFGPPRRPLALWAGVSPQAPLRRLKQQLDHLLAEAGIGPDRQGYKP
HITLARLHGPQPGPEDYVQRHKDLRGPCFRVEHVSLFLSDLSEQGASYRVLGRYPCVEE
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtttgtttattgccctggagttgccagagcccgttaaacaagccttgctgcag
cttgccgagccgatgccgggcgcacgttggcagtcagccgagcagttgcatctgactctg
aggtttgtcggcgaagttgccgccgggcaggtcgagcaggtgatagcggcactgaccagc
ctgcgttttagggactttaccctgacggtaaaagggatgggctggttcgggcctccgcgc
cggcccctggccttgtgggccggagtcagtccgcaagcacctctgcgccggctcaagcag
cagctcgatcacctgctggccgaggccggaattggccccgaccgacagggctacaagccg
catatcaccctggctcggctgcatgggccgcaaccagggcctgaggactacgtgcagcgc
cacaaagacctgcgaggtccgtgttttcgggtcgagcacgtcagtctgtttctcagtgac
ctgagcgagcagggcgccagctatcgggtgctggggcgttatccgtgcgttgaggagtag
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