KEGG   Halopseudomonas phragmitis: BVH74_02010
Entry
BVH74_02010       CDS       T07765                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
ppha  Halopseudomonas phragmitis
Brite
KEGG Orthology (KO) [BR:ppha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppha03016]
    BVH74_02010
Enzymes [BR:ppha01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     BVH74_02010
Transfer RNA biogenesis [BR:ppha03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    BVH74_02010
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: AQZ93607
UniProt: A0A1V0B0Y2
LinkDB
Position
complement(441789..442328)
AA seq 179 aa
MPRLFIALELPEPVKQALLQLAEPMPGARWQSAEQLHLTLRFVGEVAAGQVEQVIAALTS
LRFRDFTLTVKGMGWFGPPRRPLALWAGVSPQAPLRRLKQQLDHLLAEAGIGPDRQGYKP
HITLARLHGPQPGPEDYVQRHKDLRGPCFRVEHVSLFLSDLSEQGASYRVLGRYPCVEE
NT seq 540 nt   +upstreamnt  +downstreamnt
atgccgcgtttgtttattgccctggagttgccagagcccgttaaacaagccttgctgcag
cttgccgagccgatgccgggcgcacgttggcagtcagccgagcagttgcatctgactctg
aggtttgtcggcgaagttgccgccgggcaggtcgagcaggtgatagcggcactgaccagc
ctgcgttttagggactttaccctgacggtaaaagggatgggctggttcgggcctccgcgc
cggcccctggccttgtgggccggagtcagtccgcaagcacctctgcgccggctcaagcag
cagctcgatcacctgctggccgaggccggaattggccccgaccgacagggctacaagccg
catatcaccctggctcggctgcatgggccgcaaccagggcctgaggactacgtgcagcgc
cacaaagacctgcgaggtccgtgttttcgggtcgagcacgtcagtctgtttctcagtgac
ctgagcgagcagggcgccagctatcgggtgctggggcgttatccgtgcgttgaggagtag

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