Halopseudomonas phragmitis: BVH74_02070
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Entry
BVH74_02070 CDS
T07765
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppha
Halopseudomonas phragmitis
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppha03016
]
BVH74_02070
Enzymes [BR:
ppha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BVH74_02070
Transfer RNA biogenesis [BR:
ppha03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BVH74_02070
Prokaryotic type
BVH74_02070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AQZ93619
UniProt:
A0A1V0B117
LinkDB
All DBs
Position
complement(454518..455438)
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AA seq
306 aa
AA seq
DB search
MSRPRNKRRDIDGILILDKPLGMTSNAALQKVRWLFNANKGGHTGSLDPLASGVLPLCLG
EATKFSQFLLDADKAYITEARLGMTTTTGDAEGDVLEMRPVAVELAQVEALLPRFTGDIE
QIPPMYSALKQGGQPLYKLARAGETVERQARSVRISRLQLLGLDGDRLRLEVHCSKGTYI
RTLVEDIGQALGCGAHVAELRRIQAGPFSLSQAVSLDTLEQRHADGGAEALDDLLLPIDS
GLADWPVVQLTEQTAYYLNHGQAVRVPGAPAFGMVRLYEPSGRFIGIGEMTDDARVAPKR
LLRFNA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcgtccgcgtaacaagcgccgtgatatcgacggcattctgattctcgacaagccg
ctgggcatgacttcaaatgccgcactgcagaaggtgcgctggttgttcaacgccaacaag
ggtggacataccggcagtctcgatccgctggccagtggcgtgctgccgctgtgtctgggc
gaggcgaccaagttctcgcaattcctgctggatgccgacaaggcctatatcaccgaggcg
cggctgggtatgaccactaccaccggtgacgccgaaggcgatgtgctggaaatgcgcccg
gtggcagtcgagctggcccaggtcgaagctctgttgccccgctttactggcgatatcgag
caaattccgccgatgtactcggcgctcaagcagggtggccagccactgtacaagctggcc
cgggccggcgagacggtggagcgtcaggcgcgatctgttagaatatcgcgtctgcaactg
ctcggactcgacggcgatcgcctgcggctcgaggtgcactgcagcaagggcacctatatc
cgcaccctggttgaggatattggtcaggcgctgggctgtggtgcgcatgttgccgagctg
cggcgaattcaggccgggccgttcagtctgtcccaggcggtcagtctggatactctggag
caacgccatgctgacggcggggccgaagctctggacgatctgctgctgccgatcgacagc
gggctggcggattggccggtggtccagctcaccgagcagaccgcctattacctgaaccat
ggtcaggcggtccgggtgccgggtgcgccggctttcggcatggtccggttgtatgagcct
tccgggcgtttcatcggtatcggcgagatgaccgatgatgcgcgggtggcgccgaagcgt
ttgttgcgcttcaatgcatga
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