Halopseudomonas phragmitis: BVH74_02480
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Entry
BVH74_02480 CDS
T07765
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppha
Halopseudomonas phragmitis
Pathway
ppha03030
DNA replication
ppha03430
Mismatch repair
ppha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BVH74_02480
03430 Mismatch repair
BVH74_02480
03440 Homologous recombination
BVH74_02480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppha03032
]
BVH74_02480
03400 DNA repair and recombination proteins [BR:
ppha03400
]
BVH74_02480
Enzymes [BR:
ppha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BVH74_02480
DNA replication proteins [BR:
ppha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BVH74_02480
DNA repair and recombination proteins [BR:
ppha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BVH74_02480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AQZ93691
UniProt:
A0A1V0B1C1
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All DBs
Position
545116..545829
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AA seq
237 aa
AA seq
DB search
MSAQPEQLLDWPRRLANLAASSRDPRLASFYRAGCPAADCPLEQLPMVALDIETTGLDPK
RHAIVSLGLVPFDLQRIRCSQSWYQVVRPSTSLHPESIAFHRITHSEIEQAPPLKAVLSE
LLERLAGKLVVVHYRPIERGFLDQALRRELGEGWQFPLIDTMAIEAELHPQRQPGWLLRL
LGKQPISIRLADSRSRYALPLYQSHHALTDAIATAELFQAQIATHFDPQLPVSRLWC
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccagccagagcaactgctcgattggcccaggcgcctggccaacctggccgcc
agcagccgcgatccacgcctggcctccttctatcgagccggctgcccggccgccgactgc
ccactggagcagctaccgatggtcgccctggacatcgaaaccactggcctggaccccaag
cgccacgccattgtcagcctgggcctggtgcccttcgacctgcagcgcatccgttgcagt
cagagctggtatcaggtggtgcgccccagcacttcgctacatcccgaatcgattgccttc
catcgcatcacccactcggaaatcgagcaggcaccgccactaaaggcggtactgagcgag
ttactggaacgcctggctggcaagctggtagtagtgcactaccgccctatagagcgcggt
tttctcgatcaagccctgcgccgcgaactgggcgaaggctggcagtttccgctgattgac
actatggctatcgaggctgaactgcacccgcagcgccaacccggctggctgctgcgcctg
ctgggcaagcagccgatctcgatccgcctggcagacagccgcagccgttatgccctgccg
ctatatcagtcccaccatgccctgaccgacgctatcgctaccgccgaactgtttcaggcg
cagatagccacccatttcgacccgcagctgcccgtcagccggctttggtgctaa
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