Halopseudomonas phragmitis: BVH74_05030
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Entry
BVH74_05030 CDS
T07765
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppha
Halopseudomonas phragmitis
Pathway
ppha03420
Nucleotide excision repair
ppha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BVH74_05030
03430 Mismatch repair
BVH74_05030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppha03400
]
BVH74_05030
Enzymes [BR:
ppha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BVH74_05030
DNA repair and recombination proteins [BR:
ppha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BVH74_05030
MMR (mismatch excision repair)
Other MMR factors
BVH74_05030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
AtzG-like
Motif
Other DBs
NCBI-ProteinID:
AQZ94156
UniProt:
A0A1V0B2J3
LinkDB
All DBs
Position
1079097..1081268
Genome browser
AA seq
723 aa
AA seq
DB search
MDISHLINSLNDAQRQAVTASPGQQLVLAGAGSGKTRVLVHRIAWLIQVENASPWSILSV
TFTNKAAYEMRQRIEQLLGISPQGMWVGTFHGLAHRLLRAHWREAGLAEQFQILDSDDQQ
RLVKRVIRELGLDENQWAPRQAQWWINAQKDEGLRPQHIQPAGDLYLTTMLRIYAAYEQA
CARAGVVDFAELLLRSLELWRDNAGLREQYQARFRHLLVDEFQDTNAVQYAWLRLIAGSN
PSLMVVGDDDQSIYGWRGARIENIQQFQSDYPNAELIRLEQNYRSTALILKAANALIGNN
AGRLGKELWTDGSEGEPIALYAGFNEQDEARYIVERIEQAVGEGMARREIAILYRSNAQS
RVLEEALLRAGIPYRIYGGQRFFERAEIKNAMAYLRLVANRGDDGALERIINLPTRGIGD
KTVEALREHARACNVTLWQAACDMLDMKALPGRAANAVQGFLQLIEEMAQRVEGLPLYSM
TQQVIEHSGLLRFHEQEKGDKAQARVENLEELVSAARAFENDQAELEEEGNVLLAFLAHA
SLEAGDTQADQFEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQQLVITWAETRRLYGSETFNKISRFVREIPSELIREVRLGNQVSRPFGPKN
KLFQAEATESTGFALGQRVAHGLFGEGVVLNYEGHGAQARIQVNFDDEGSKWLMVAYAKL
QPL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcacaccttatcaactcgcttaacgacgcccagcgccaggcggtcaccgcc
agccctgggcaacaactggttctggctggcgccggctcgggcaagacccgggtgctggtg
catcgcatcgcttggttgatccaggtcgagaatgcctcgccctggagcattctgtcggtg
acctttaccaacaaggccgcctatgaaatgcgccagcgtatcgagcaactactcggtatc
tcgccgcagggcatgtgggtcggcaccttccacggcctggcccaccgcctgctgcgcgcc
cattggcgtgaggccggactggccgaacagttccagatcctcgacagcgatgaccagcag
cggctggtcaagcgggtcatccgcgaactggggctagatgagaaccagtgggcgccgcgt
caggctcagtggtggatcaacgcacaaaaggacgaaggcctgcgcccgcagcacatccag
ccggccggggacctgtacctgaccaccatgctgcgcatttatgcggcctatgaacaggcc
tgcgcgcgtgccggggtggtggatttcgccgaactgctgttgcgctcgctggagctgtgg
cgcgacaacgccgggttgcgcgagcagtaccaggcgcgtttccgtcacttgctggtcgac
gagtttcaggacaccaacgctgtgcagtatgcctggctacgcctgatcgccggtagcaac
ccgagtctgatggtggttggcgatgatgaccagtcgatctacggctggcgcggcgcgcgg
atcgagaacatccagcagttccaaagcgactaccccaacgccgagctgatccggctggaa
cagaactaccgctccaccgcgctgatcctcaaggccgccaacgcgctgatcggcaacaac
gccgggcgtctgggcaaggagctgtggaccgacggcagcgaaggcgaaccgattgccctg
tatgccggtttcaacgaacaggacgaggcgcgctatatcgtcgagcgtatcgagcaggcg
gtgggcgagggcatggcccgccgtgaaatcgccattctctatcgttccaacgcccagtcg
cgggtgctcgaagaggctctgctgcgtgccggcattccctaccgcatctacggtggacag
cgcttcttcgagcgcgccgagatcaagaacgccatggcttacctgcgtctggtcgccaac
cgcggcgatgacggcgcgctggagcggatcatcaacctgccgacccggggcattggcgac
aagaccgtcgaagcgctgcgcgagcacgcccgcgcctgcaacgtcacgctgtggcaggca
gcctgcgacatgctcgatatgaaagccctgcccgggcgcgcggccaatgcggtccagggc
tttttgcaactgattgaggaaatggcccagcgggtcgaaggtctgccgctctacagcatg
acccagcaggtcatcgaacacagcggcctgctgcgttttcacgaacaggaaaagggcgac
aaggcccaggcacgggtcgaaaaccttgaggaactggtgtcggctgcccgcgccttcgag
aatgatcaggctgagctggaagaagagggcaatgtgctgctggccttcctcgcccatgct
tcgctggaggccggcgatacccaggccgaccagttcgaggacagcgtccagctgatgacc
ctgcacagcgccaagggcctggaattcccgctggtgttcctggccggagtggaagagggc
ctgttcccgcacaagatgagcctggaagagcccggccggctggaggaggagcggcgtctg
gcctatgtcggcatcactcgcgccatgcagcagttggtgatcacctgggcggaaacccgg
cggctgtatggcagcgaaacgttcaacaagatttcccgctttgtgcgcgagatcccatcc
gagctgattcgcgaggtacgcctgggcaaccaggtcagccgtccgttcgggccgaagaac
aagctgttccaggccgaagccaccgaaagcaccggcttcgccctgggtcagcgagtggcg
cacggccttttcggcgagggcgtggtactcaactacgaaggacatggcgcccaggcccgt
atccaggtcaacttcgacgacgaaggcagcaaatggctgatggtcgcctatgccaagctg
cagccgctgtaa
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