Halopseudomonas phragmitis: BVH74_07240
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Entry
BVH74_07240 CDS
T07765
Name
(GenBank) 3-methyladenine DNA glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ppha
Halopseudomonas phragmitis
Pathway
ppha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BVH74_07240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppha03000
]
BVH74_07240
03400 DNA repair and recombination proteins [BR:
ppha03400
]
BVH74_07240
Enzymes [BR:
ppha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BVH74_07240
Transcription factors [BR:
ppha03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BVH74_07240
DNA repair and recombination proteins [BR:
ppha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BVH74_07240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AQZ94561
UniProt:
A0A1V0B3U6
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All DBs
Position
1573176..1574675
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AA seq
499 aa
AA seq
DB search
MKLSPATCYQAVQARDVRYDGRFFTCVKSTGVYCRPICPARTPRLENCLFVTSAAAAQEA
GFRPCLRCRPESSPSSAAWAGTSAVVSRALALIEAGALDEASVEALAERLGLGSRHLRRL
FMRHLGASPVAVAQTRRVLLAKQLIHQTRLPMTSVAMASGFGSVRRFNETFQRLYMRPPG
SLRQQVEEFGQWSELSLLLAYRPPYDWEAMLAFLRQRALLGVELVDADSYQRSIRVGREY
GWVRVRQEPGAHALRAHICVSGLQVLPQVIDRLRCLFDLKADPQVIRQTLAADPGLAGLL
DKRPGLRLPGGWEPFEVAVRAVLGQQVTVGAGVRLAQNLVERLAEPVPEALRRPGITRFF
PEPAAFVAPALNGLGMPGARLATLLHLAEAFVREPEWFARQADLESTLERWRAIPGIGDW
TAQYIAIRALQETDAIPASDVALQRALGQSGKRPGVRQVLARAEAWRPWRAYALMHLWQA
DAEGNALPLTEDDRHATVA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctctccagcgacctgttatcaggcggttcaggcccgggatgtccgttatgac
gggcgcttcttcacctgtgtgaaaagtaccggggtgtactgccgaccgatttgcccggcc
cgcacgccgcggctggaaaattgcctgttcgtcaccagtgcggcggcggcgcaggaggcg
gggtttcgcccctgtctgcgttgccgcccggaaagctcgccgtcatcggcggcctgggcc
ggtacctcggcggtagtatcccgagcgcttgccctgatcgaagcaggagccttggatgaa
gccagcgttgaggcattggctgagcggctggggttgggcagtcgacatctgcgccggctg
ttcatgcgtcatctgggcgcatctccggtcgccgtggcacagacccggcgggtgttgctg
gccaagcaactgatccaccaaacccgtctgccgatgacgtcggtggccatggccagtggt
tttggcagcgtgcggcgtttcaatgagaccttccagcgcttgtatatgcgcccacccggg
agcttgcggcaacaggtcgaggagttcgggcagtggtccgagttgtcgctgttgctggct
taccgtcccccctatgattgggaggccatgctggcttttttgcgtcagcgggcgttgcta
ggggttgagctggtggatgcggacagctatcagcgcagcatcagggttggccgcgaatat
ggctgggtccgggtcaggcaggagcctggggctcacgccttgcgggcacatatctgtgtg
tctgggctgcaggtgctgccgcaggtgattgaccgtctgcgctgtttgtttgacctcaag
gccgatccgcaggtgattcgtcagaccctggcggctgatccgggcttggcagggctgctc
gacaagcgtccgggattgcgtttgcctggcggttgggagcctttcgaggtcgcggtgcgt
gcagtgctgggccaacaggttacggttggggctggcgtcaggctcgcccagaatctggtc
gaaaggttggccgagccggtgccggaggctttgcgtcggcccgggataacgcggtttttt
cctgagccggcggctttcgtagcgccggcactgaacggcttgggcatgcccggcgcacga
ctggcgacattgctgcatttggctgaggcttttgtccgcgagcccgaatggtttgcccgt
caggcggatttggagagcacccttgagcgctggagggcgataccgggaattggcgactgg
actgcccagtatattgctatacgggccctgcaggagaccgatgccattccggcctctgat
gtcgctttgcagcgggcgcttggtcagtccgggaaacgtcccggggtgcgtcaggtgttg
gcccgggctgaggcctggcgcccgtggcgggcctacgcattgatgcatttgtggcaggct
gacgccgaaggcaacgcactgcccctaaccgaggatgatcgacatgcaactgtggcttga
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