Halopseudomonas phragmitis: BVH74_08870
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Entry
BVH74_08870 CDS
T07765
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppha
Halopseudomonas phragmitis
Pathway
ppha03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BVH74_08870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppha03019
]
BVH74_08870
03009 Ribosome biogenesis [BR:
ppha03009
]
BVH74_08870
Messenger RNA biogenesis [BR:
ppha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BVH74_08870
Ribosome biogenesis [BR:
ppha03009
]
Eukaryotic type
Pre-60S particles
RNases
BVH74_08870
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AQZ94853
UniProt:
A0A1V0B4J9
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All DBs
Position
1941285..1941827
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AA seq
180 aa
AA seq
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MQNPDNLIWIDLEMTGLDPDKDVIIEIATVVTDPQLNVLAEGPVFAVHQPDALLDGMDEW
NTRQHGQSGLTQRVKDSRIDAAEAERQTLVFLQQWVPAGRSPMCGNSICQDRRFLYRGMP
ALEKYFHYRNLDVSTLKELAARWAPEVKDGFKKQSSHLALDDIRDSIAELRHYREHFIKV
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccccgacaacctgatctggatcgacctggaaatgaccggcctggatccggac
aaggacgtgatcattgaaattgccaccgtggtgactgatcctcagcttaatgtgctggcc
gaggggccggtgtttgctgtgcatcagccggatgcactgcttgacggcatggatgagtgg
aatactcgccagcacggccagtccggcctgacccagcgggtcaaggacagtcgcattgat
gcggccgaggccgaacggcagactctggtgtttctccaacagtgggtgccggcgggtcgt
tcaccgatgtgtggcaacagcatctgtcaggaccgacgctttctctatcgtggcatgcca
gcgctggagaaatatttccattaccgcaatcttgatgtttcaacgctaaaagagctggcc
gcgcgctgggctccagaggtcaaggacgggttcaagaaacagagcagtcacctggcgctc
gacgatatccgcgactcgattgccgagctgcgccattatcgtgagcatttcatcaaggtc
tga
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