Halopseudomonas phragmitis: BVH74_10500
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Entry
BVH74_10500 CDS
T07765
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
ppha
Halopseudomonas phragmitis
Pathway
ppha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BVH74_10500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppha03400
]
BVH74_10500
Enzymes [BR:
ppha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BVH74_10500
DNA repair and recombination proteins [BR:
ppha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BVH74_10500
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BVH74_10500
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BVH74_10500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AQZ95150
UniProt:
A0A1V0B5I1
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All DBs
Position
2265431..2266879
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AA seq
482 aa
AA seq
DB search
MAESFFWYDFESTGIDPRRDRPLQVAGVRTDAELNEVDDPLCIDCQLSPDILPHPMACLV
TGIGPERVMAGLPEAEFIQRLHHEMATPGTCSVGYNNLRFDDEMTRFSLYRNFYDPYARE
WQSGNSRWDLLDGLRAAHALRPEGIEWPQQDGLVSLRLELLTAANGIDHGQAHDALADVR
ATIAMARLLRQTQPKLFNYLLGLRRKPAVNALIDLRNVRPLVHVSGRFGRERHGLALVLP
LGWHPVNRNALIVYDLAADPGLLNELTAEQLRQRLYTRQEDLAEGQQRPGLKLVHINRCP
FLADLKVLRAEDIARLGLDMPLLLANAQALGTWRETGQALLREVYSDTAEQKEAQSDPEL
QLYDGFLNDTDRQLLPDIRQADPDTLARHSWPLRDQRLVDLLFRYRARNFPDTLTASEQE
QWRQFCRQRLQGRLPGAPLTLADFNRVLSEAMPQASAQQQQLLQDWQRYAEDLARYLAVK
ME
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggccgagagttttttctggtacgacttcgagtcaaccggcatcgatccgcgtcgtgac
cggcctctgcaggtggccggcgttcgcaccgatgcagagttgaacgaggtcgacgatcca
ctgtgcatcgattgccaactgtcgccggatattctgccgcatccgatggcctgtctggtt
accgggataggcccggaacgggtcatggcggggctgcccgaggctgaattcattcagcgt
ctgcatcatgaaatggctacgccgggcacctgtagcgtgggttacaacaacctgcgcttc
gacgacgagatgacccgtttcagcctgtaccggaatttctatgatccctatgcccgtgag
tggcagtcaggcaatagtcgctgggacctgcttgatggcttgcgtgccgcccacgccttg
cgccccgagggcatcgagtggccacagcaagacgggctggtcagcctgcgcctggagctg
ctgacggccgccaatggcattgatcatggtcaggctcatgatgctttggccgatgtccgt
gcgaccattgccatggctcgcctgttgcgtcagacccagccgaaactgttcaactatctg
ctggggctgcgccgtaagccggcggttaatgccctgattgatctgcgcaacgttcgaccg
ctggtccatgtgtctggtcgtttcgggcgtgagcgtcacggattggcgctggtgttgccg
ctgggctggcatccggtcaatcgcaatgcattgattgtctatgacctcgctgccgacccg
ggcctgctcaatgagctgacggccgagcagttgcgtcagcgcctgtacactcgtcaggaa
gacttggccgaggggcagcagcgtccggggctgaagttggtgcatatcaatcgctgtccg
tttctggccgacctcaaggtgttgcgcgctgaagatattgcgcgtctggggctggatatg
ccgcttttgctggctaatgcccaggctctggggacatggcgggaaaccggccaggcgctg
ctcagggaagtttacagtgatacggctgagcagaaggaggctcagtctgatccagagttg
caactctatgacgggtttcttaacgatacggacaggcagttgctgccggacattcgccag
gctgaccccgatacactggctcgacactcctggcccttacgtgaccagcggttggttgat
ctgttgttccgttatcgggcgcgtaactttcccgatactctgactgcaagcgagcaggaa
cagtggcggcagttttgtcggcagcggcttcaggggcggctgcccggagcaccattgacc
ctggcagactttaatcgggtcttgagtgaggcgatgccccaagcttctgctcaacagcag
cagttgctgcaagactggcagcgctatgccgaggatctagcccgttatctggccgtgaag
atggagtga
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