Halopseudomonas phragmitis: BVH74_12325
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Entry
BVH74_12325 CDS
T07765
Name
(GenBank) hypothetical protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ppha
Halopseudomonas phragmitis
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppha01011
]
BVH74_12325
Enzymes [BR:
ppha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BVH74_12325
Peptidoglycan biosynthesis and degradation proteins [BR:
ppha01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BVH74_12325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM_OapA
Sigma70_r4
LamB_YcsF
Motif
Other DBs
NCBI-ProteinID:
AQZ95488
UniProt:
A0A1V0B6D4
LinkDB
All DBs
Position
complement(2659550..2661085)
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AA seq
511 aa
AA seq
DB search
MRFYQKLLISHGKTCLALILAVLAGCQSSPSLQQHEPSLKPGRTAEPASPPRASSKPRAR
QAAPEEPHTLWSRIRQGFLLDPALIDNPRIDQQRLAFLNQTRYFEVSGERAQRYLHYVVE
QLEARELPQELALLPFVESSYNPMAYSSAHAAGLWQFIPSTGQQFSLRQDWWYDGRRDVV
ASTQAAMDYLTQLNERFDGDWLLALAAYNCGEGCVGRAIQRNQALNLPTDYWNLQLPRET
MNYVPKLLALAQIIDSPTQHGAALPELPDEPYFAEITIEHQLELSKAAELADISTDELLR
LNPAFKQRITAPQGTYQMLVPVDRAEQFSAALAALPEDQRVNYQRYQVRSGDTLSQIARR
YQVSVGALREVNSINGNLIRVGQTLMLPRLGDSEPAPQSVAAIAATTPQELRYQVQPGDN
LWAIARNHGLSVSQIKQHNGLESPALRAGQTLRLPAAASASQNRSMTYTVKSGDSLYSIA
RQFKVEIQNIRDWNQLGRHIQPGQQLTLFVP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttatcagaagttactcatctcacatggcaaaacctgccttgcactgattctg
gcggtgctggcaggttgccaaagtagtcccagccttcaacaacatgagcctagcctcaaa
cccggcagaaccgccgaacccgcgagcccgcctcgcgccagcagcaaaccccgcgcccgc
caggccgcccctgaagaaccccataccctgtggtcacgcattcgccagggtttcctgctt
gacccggccctgatcgacaacccgcgcattgaccagcagcgtctggcctttctcaaccag
acccgttatttcgaagtcagcggcgaacgagctcaacgttacctgcattacgtagtcgag
caactggaggcccgtgaactgccccaggaactggcgctgctgccgttcgttgaaagctcc
tacaacccgatggcctattccagcgctcatgccgctggtctttggcaattcattccctcc
accggtcagcagttctcgctgcgccaggactggtggtacgacggccggcgtgacgtggtt
gcctcgacgcaggctgccatggactacctgacccagctcaacgagcgcttcgatggcgac
tggctactggctctggctgcttacaactgtggagaaggctgcgttggccgggctattcaa
cgcaaccaggcgctgaacctgccgaccgattactggaatctgcaactgccgcgcgagacc
atgaactacgtgcccaagctgctggccctggcacagatcattgacagcccgactcaacat
ggcgcagctctacccgaactgccggacgaaccctactttgccgaaatcaccatcgagcac
caactggagctgagcaaggctgccgaactggccgatatcagcaccgacgaattgctgcgc
ctgaacccggccttcaagcaacgtatcaccgcaccgcagggcacctaccaaatgctggtt
ccggttgatcgcgccgaacagttcagcgccgcgctggcagccctgcccgaggatcaacgg
gttaactaccagcgctatcaggtccgcagtggcgataccctgtcgcagattgcccgtcgc
taccaagtcagcgtaggtgctctacgcgaagtaaacagcatcaatggcaacctgatccgt
gttggtcagaccctgatgctgcctcgcctgggtgatagcgagcccgcgccccagagcgtc
gccgcaattgccgctaccacaccccaggagctgcgctatcaggtccagcccggcgacaac
ctctgggccattgcccgtaaccatggcctgagtgtgagccaaatcaagcagcacaacgga
ctcgaaagcccggcattgagggcaggccagacgctgcgcctgccagctgcggccagtgcc
agccagaaccgcagcatgacttatacggtcaaaagtggcgactcgctctacagcatcgct
cgccagttcaaggtcgagatccagaatatccgcgactggaaccagcttggccggcacatc
cagcctggccagcaactgaccctgttcgtgccctga
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