Halopseudomonas phragmitis: BVH74_12890
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Entry
BVH74_12890 CDS
T07765
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ppha
Halopseudomonas phragmitis
Pathway
ppha00071
Fatty acid degradation
ppha00280
Valine, leucine and isoleucine degradation
ppha00310
Lysine degradation
ppha00362
Benzoate degradation
ppha00380
Tryptophan metabolism
ppha00410
beta-Alanine metabolism
ppha00640
Propanoate metabolism
ppha00650
Butanoate metabolism
ppha00907
Pinene, camphor and geraniol degradation
ppha00930
Caprolactam degradation
ppha01100
Metabolic pathways
ppha01110
Biosynthesis of secondary metabolites
ppha01120
Microbial metabolism in diverse environments
ppha01200
Carbon metabolism
ppha01212
Fatty acid metabolism
Module
ppha_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
BVH74_12890
00650 Butanoate metabolism
BVH74_12890
09103 Lipid metabolism
00071 Fatty acid degradation
BVH74_12890
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
BVH74_12890
00310 Lysine degradation
BVH74_12890
00380 Tryptophan metabolism
BVH74_12890
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BVH74_12890
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
BVH74_12890
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BVH74_12890
00930 Caprolactam degradation
BVH74_12890
Enzymes [BR:
ppha01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
BVH74_12890
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
BVH74_12890
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
BVH74_12890
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
BVH74_12890
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AQZ95589
UniProt:
A0A1V0B6P7
LinkDB
All DBs
Position
2766893..2769040
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AA seq
715 aa
AA seq
DB search
MIYEGKAITIQALEDGIVELKFDLQGESVNKFNRATLAELQAAVEVLQGDSSIKGVIVTS
GKDVFIVGADITEFVNTFQLPEEDLVAGNLEANKIFNAFEDLNVPTVAAINGLALGGGFE
MCLACDFRVMAASAKIGLPEVKLGIYPGFGGTVRTPRLIGVDNAIEWICAGAEQRADKAL
KVGAVDAVVEDAKLKDAALDLVKRAAAGEIDFKAKRQPKLEKVKLNTIEQMMAFETSKGF
IAGQAGPNYPAPLEAVKTIQKAANFTREKALEVEAAGFAKLAKTTVAQSLVGLFLNDTEL
KRKAKQYDKAAADVNLAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEGIQLGLDEASKL
LGKRVEKGRMKPADMAKALNAIRPTMSYGDFGNVDIVVEAVVENPKVKHAVLAEVESQVR
EDAIITSNTSTISITYLAQALKRPENFCGMHFFNPVHMMPLVEVIRGEKSSDRAVATTVA
YAKKMGKTPVVVNDCPGFLVNRVLFPYFGGFARLLGMGADFQRVDKLMEKFGWPMGPAYL
MDVVGMDTGHHGRDVMAEGYPDRMADKTKTAVDVMYEANRLGQKTGKGFYAYEMDKKGKP
KKVVDPETYELLKPIVLEQRELTDEEIVEIMMVPLCLETVRCLEDGIVESAADADMGLIY
GIGFPPFRGGALRYIDTLGVAEFVAMADKYAEFGPMYHPTEKLREMAKNGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacgattcaggccctcgaagacggcatcgtcgagctg
aagttcgacctgcagggcgagtctgtcaacaaattcaatcgtgccaccctggctgaactg
caagccgccgtagaggttttgcagggcgacagcagcatcaagggtgtcatcgtgaccagc
ggcaaggacgtgttcatcgtcggcgccgacatcactgagttcgtcaacaccttccaattg
ccggaagaagacctggtggctggtaacctggaagccaacaagatcttcaatgcctttgaa
gacctgaacgtcccgaccgtggccgccatcaatggcctggccctgggtggcggtttcgaa
atgtgtctggcctgtgatttccgggtcatggccgccagcgccaagattggcctgccggaa
gtcaagctgggcatctacccgggctttggtggcaccgtacgtaccccgcgtctgatcggt
gtcgacaacgctatcgaatggatctgcgccggtgccgagcagcgcgccgacaaggccctg
aaagttggcgcagttgacgctgtagtcgaagacgccaaacttaaggacgccgcactggat
ctggtcaagcgtgccgctgccggcgagattgacttcaaggccaagcgtcagcccaaactg
gaaaaagtcaagctcaacaccatcgagcagatgatggctttcgaaacctccaagggtttc
atcgctggtcaggccggtccgaactatccggccccgctggaagccgtcaagaccatccag
aaagctgccaacttcactcgtgaaaaggctctggaagtcgaagctgccggttttgccaaa
ctggccaagaccaccgttgctcagtcgctggtgggtctgttcctgaacgacaccgagctc
aagcgtaaagccaagcagtacgacaaggctgctgcagacgtgaatctggctgcggtactg
ggcgctggcatcatgggcggcggtatcgcttaccagtcggcggtcaagggcactccgatc
ctgatgaaggatatccgtgaagagggtattcaactgggtctggatgaggcctccaagctg
ctcggcaagcgtgtcgagaagggccgtatgaagccggccgacatggccaaagcgctgaac
gccattcgcccgaccatgtcctatggcgatttcggcaatgttgatatcgtggtcgaagcc
gtcgtcgagaaccccaaggtcaagcacgctgtgctggctgaggtggagtcgcaggtgcgt
gaggatgcaatcatcacctccaacacctcgaccatctcgatcacttacctggcccaggcg
ctcaagcgtccggaaaacttctgcggcatgcacttcttcaacccggtacacatgatgccg
ctggttgaggtgatccgtggcgagaagtccagtgatcgcgctgttgccactaccgtggcc
tatgccaagaagatgggcaagacccctgttgtggtcaacgattgccccggcttcctggtc
aaccgcgtactgttcccatattttggcggctttgctcgcctgttgggcatgggcgccgat
ttccagcgcgtcgacaagctgatggaaaaattcggctggccgatggggccggcttatctg
atggacgtggttggcatggataccggtcaccatggccgtgacgtgatggccgaaggttat
ccggaccgtatggctgacaagaccaagactgctgttgacgtcatgtacgaagccaatcgc
ctgggtcagaagaccggcaagggcttctatgcctatgagatggacaagaagggcaagccg
aagaaggttgttgatcccgagacctatgagctgctgaagccgatcgtgctggagcagcgc
gagctgactgatgaggaaatcgtcgagatcatgatggttccgctgtgtctggagaccgta
cgctgcctggaagacggtatcgtcgaaagcgctgcggacgctgacatgggcctgatctat
ggtatcggcttccctcccttccgcggtggcgcactgcgctacatcgacaccttgggtgtg
gccgagttcgttgccatggccgataagtacgcggagttcggtcctatgtatcacccgacc
gagaagctgcgtgaaatggccaagaacggtcagaaattcttcggttaa
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