Halopseudomonas phragmitis: BVH74_14955
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Entry
BVH74_14955 CDS
T07765
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ppha
Halopseudomonas phragmitis
Pathway
ppha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BVH74_14955
09124 Replication and repair
03420 Nucleotide excision repair
BVH74_14955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppha03021
]
BVH74_14955
03036 Chromosome and associated proteins [BR:
ppha03036
]
BVH74_14955
03400 DNA repair and recombination proteins [BR:
ppha03400
]
BVH74_14955
Enzymes [BR:
ppha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BVH74_14955
Transcription machinery [BR:
ppha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BVH74_14955
Chromosome and associated proteins [BR:
ppha03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BVH74_14955
DNA repair and recombination proteins [BR:
ppha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BVH74_14955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AQZ95970
UniProt:
A0A1V0B7V3
LinkDB
All DBs
Position
3229115..3231370
Genome browser
AA seq
751 aa
AA seq
DB search
MSYRIGVRALCEFTAREGDLDLRFTPAPTAEEGQAGHRTVIARRGPDYLSEIPVAGDYPG
LRVVGRADGYDPDFKLLEEIKTHRGDVSRIPHNHQVLHWAQVKVYGWLLCQQWGMDEIDL
AVVYFNVVTQQETVFRERFGAESLREFFQLQCQRFIAWAEQETLHRQRRDHDLGALSFPY
PSFRHGQRQLAEAVYRAARDGEQLLAQATTGIGKTLGTLFPQLKAFPAQQLDRLFFLCAK
TPGRHLALEALQALHQHNPGLNLRVLEHVARDKACEYPERACHGDSCPLAKGFYDRLPAA
RLAALQAGWLDQVQVRAIAREHQICPYYLSQELCRWSDVVVCDYNYYFDLGALLYSLTLI
NDWRVTLLVDEAHNLIDRARGMYSAELDQARFNSLRRSAPARLKGPLDRVARHWNQLHQD
QQADYQIYPQVADLFVASLNKAVSALTDHLTDQPTGNDTALLQFYLDAMLFCRLAEAYGP
HSLFDITRYQDRQQALSTLCLRNVIPAPFLAERFRLAHSSTLFSATLSPAPYYRDLLGLN
QDCQALEVESPFRPEQLDVRITSKLSTRYPDRTDSLGPISALIAQQFHQRPGNYLAFFSS
YDYLQQALAHLRRHYPQIPLWEQSRQMNESQRQSFLQQFTSESQGVGFAVLGGAFGEGID
LPGPRLIGAFIATLGLPQVNPVNEEIRQRMEDQFGNGYDYAYLYPGLQKVVQAAGRVIRT
TEDHGVVWLLDQRFAERRIRRWLPSWWQIRS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgagctaccggatcggggtacgcgcgctctgtgagttcaccgcccgcgagggcgatctg
gacctgcgtttcaccccggcgccaaccgccgaggaaggccaggccgggcaccgtacggtt
attgcccggcgcggcccggactacctcagtgaaatcccggtggcaggcgactacccaggc
ctgcgggtagttgggcgggcagatggctatgaccctgacttcaaactgctggaagaaatc
aagacccaccgtggcgatgtcagccgcattccccacaaccatcaggtactgcactgggcc
caggtcaaagtctacggctggttgctatgccagcagtggggcatggatgaaatcgacctg
gcggtggtgtatttcaacgtcgtcacccagcaggaaaccgtatttcgtgaacgctttggc
gccgaatcgctgcgcgaatttttccagttgcagtgccagcgtttcatcgcctgggctgaa
caggaaaccctgcatcgtcaacgtcgcgatcatgacctgggcgctttgagctttccctat
ccgagctttcgccacggtcagcgccaactggccgaagctgtttatcgcgccgcccgtgat
ggcgagcaactgctggctcaggctaccacaggaattggtaagacactgggcaccctgttt
ccccagctcaaggcctttcccgcccagcaactggaccggctgttctttctctgtgctaaa
acacccggccggcatctggcgctggaggccttgcaggctctgcaccagcataatcccggc
ttgaacctgcgagtactcgaacacgtcgcccgcgacaaggcctgcgaataccccgaacgc
gcctgtcatggtgattcctgcccgctggccaagggcttctacgaccgtttgccggccgca
cgtctggcggcgctacaagctggctggctggatcaggtccaggtccgagccatcgccagg
gagcaccagatctgcccttattatctgagccaggagttgtgtcgctggagcgatgtagtg
gtctgcgactacaactactacttcgatcttggtgccctgctctatagcctgaccctgatc
aacgactggcgcgttaccctgctggtcgatgaagcgcacaacctgatcgaccgggcccgc
ggcatgtatagcgccgaactcgaccaggcccgcttcaacagcctgcgccgtagcgctccc
gcccgactcaagggcccactggatcgggtcgcccggcactggaaccagctacaccaggac
caacaagccgactatcagatttatccgcaggttgccgacctgtttgtcgccagcctgaac
aaggccgtcagtgccctgactgaccacctgaccgaccagcccaccggcaatgacaccgcg
ctgttgcagttttacctggatgccatgctgttctgccgactggccgaggcctacggcccg
cactcgctgttcgacatcacccgctaccaggaccgccagcaagcgctgtcaaccctgtgc
ctgcgcaatgtaattcccgcgccctttcttgccgaacgctttcgcctggcgcacagcagc
accctgttctcggccaccttgagcccggcgccctactaccgggacctgctggggctgaat
caggactgccaggccctggaggttgaatcgccttttcgcccggagcaactcgacgtgcgc
attacctccaaactatcgacccgctacccggatcgcaccgacagcctaggccccatcagc
gccctgatcgcccagcagtttcaccaacgccccggcaactatctggcgtttttcagcagc
tacgactatctgcaacaggccctggcgcatctgcgccgtcattatccgcagatacctctg
tgggagcagtcacggcaaatgaacgaatcccagcgccagagttttctccagcagttcacc
agcgaatcccaaggggtgggctttgccgtgctcggcggcgcctttggcgaaggcatcgac
ctgccgggaccacgcctgatcggcgcgtttatcgccaccctgggcctgccgcaagtcaat
ccggtgaacgaggaaatccgccagcgcatggaagatcagttcggcaatggctatgactac
gcctacctctacccgggcctgcagaaagtggtccaggccgctggccgagtcatccgtacc
accgaagatcatggcgtggtctggttactggatcaacgctttgctgagcgccggatccgc
cgctggttgcccagttggtggcagatccgcagctga
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integrated database retrieval system
