Halopseudomonas phragmitis: BVH74_17125
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Entry
BVH74_17125 CDS
T07765
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppha
Halopseudomonas phragmitis
Pathway
ppha03030
DNA replication
ppha03430
Mismatch repair
ppha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BVH74_17125
03430 Mismatch repair
BVH74_17125
03440 Homologous recombination
BVH74_17125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppha03032
]
BVH74_17125
03400 DNA repair and recombination proteins [BR:
ppha03400
]
BVH74_17125
Enzymes [BR:
ppha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BVH74_17125
DNA replication proteins [BR:
ppha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BVH74_17125
DNA repair and recombination proteins [BR:
ppha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BVH74_17125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
AAA_16
AAA_18
TraC-like
AAA_2
AAA_30
ResIII
DUF3646
AAA_14
AAA_19
PIF1
nSTAND3
Rad17
TsaE
AAA_28
SKI
zf-CXXC
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AQZ96369
UniProt:
A0A1V0B8V7
LinkDB
All DBs
Position
complement(3710291..3712243)
Genome browser
AA seq
650 aa
AA seq
DB search
MSYQVLARKWRPRLFREMVGQTHVLQALINALDHNRLHHAYLFTGTRGVGKTTIARILAK
CLNCEVGVSSEPCGQCAACREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFSLKNMPP
ERVVEHLRHVLGEENVPHDDESLWLLGRAADGSMRDALSLTDQAIAFGNGTLRVAEVRNM
LGTIDHGQVFGLLEALAAHDARALLVAVAELAEQGADFAGVLAELISTLQRLAIAQVLPE
AADNSQGDRERVLDLAGRISAEDVQLFYQLALHGRRDLPLAPDPRGGFEMALLRMLAFRP
GTQADGPAAPPTPLTGKSPGSSQPKADPQTTGPAAVAAPVVSSSLPPAEPVAPAPAPAPS
MPASPERQVSEPQPQAEPPLPVNVTRPLNPSTPVKPPVEDSPPEWLEAPPLEDGPDGAEQ
DEDDVDVSQYLGDWQPEAESVAQPSQEPEADEVSDLPVASGIAAEWLEMFPSLGLSGLTQ
SIAAHCQLISREATVWRLHLDPGHSALYNENHRQRLQQALSEHVGETVTLDVQIQAPDQE
TPAVAAARRKVARQKEAEASIQADPLVQALIRDFSARICDDSIRPIDTAK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccaggtactagcccgtaaatggcgtccgcgcctgttccgtgaaatggtcggc
cagacccatgtgctccaggccctgatcaacgcgctggatcacaatcgtctgcaccatgcc
tacctgtttaccggtacccgtggggttggcaaaaccaccattgcgcggattctggccaag
tgcctgaactgtgaggtcggcgtcagttccgaaccctgcggccagtgcgcggcttgtcgg
gagatcgacgaaggtcgtttcgtcgacctgatcgaagtcgacgccgccagccggaccaag
gtcgaggatacccgtgagctgctcgacaacgtgcagtacgcgcctactcgcgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctttccagccacagcttcaacgccttgttg
aaaactctggaagagccgcccgagcacgtcaaattcctgctggctaccaccgatccgcaa
aagctgccggtcaccatcctgtcgcgttgcctgcagttctcgttgaagaatatgccgccg
gagcgagtggttgagcaccttcgccatgtgttgggcgaagagaacgttccccatgatgat
gagtcactgtggctattgggccgcgccgccgatggttcgatgcgcgatgccctgagtctg
actgaccaggctatcgcttttggtaacggcaccttgcgggttgccgaggtgcgcaacatg
ctcggcaccatcgaccacggccaggtgtttggtctgctcgaagcgctggccgcccatgat
gcccgggcgttgctggtggcggtggccgaactggccgagcagggcgccgactttgccggt
gtgctggccgagctgatttccaccctgcagcgcctggcgatagcccaggtgttgccggag
gctgccgacaacagccagggtgatcgtgagcgggtgctggacctggccgggcgtatcagc
gctgaagatgtgcaactgttttaccagttggccttgcacgggcgtcgtgacctgccgttg
gcgccggacccgcgtggcggcttcgagatggctttgctgcgcatgctggcgttccggcca
ggcacccaggcagatggtccggccgcaccgccaacgccactgacgggaaagtccccggga
tcgagccagcccaaggctgatccccagacgacagggccagccgcggtagcggcaccggtt
gttagttccagtttgccgccagccgagccagttgcaccggcccctgcgccagccccttcg
atgccggcgagcccggagcggcaagtgtctgagccgcaaccccaggctgaaccgccgttg
cctgttaatgtgaccaggccgctgaacccgagtacgccggtcaagccgccggtcgaagac
agcccgccagagtggctggaagcgccgccgctggaggatggccccgatggtgccgagcag
gacgaggatgatgtcgatgtcagccagtatctgggtgactggcaacccgaggccgagtct
gtagcacaaccctcgcaagagccggaagccgatgaggtcagtgatctgccggttgccagc
ggcatcgccgccgaatggctggagatgttcccgagtttgggcttgagtggtctgacccag
agcattgccgcccattgccagttgatcagccgtgaagcgaccgtctggcggctgcatctg
gaccctgggcatagcgcgctgtacaacgaaaatcatcgtcagcgcctgcagcaggcgctc
agcgagcatgtcggcgagacggtgacgctggacgtgcagattcaggccccggatcaggaa
acaccggccgtggctgcggcgcggcgcaaggtcgcccggcagaaagaggccgaggccagc
attcaggctgacccgctggtccaggcattgatcagggatttctcggcccggatctgcgat
gacagtatccggcccattgatacagcgaaataa
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