Halopseudomonas phragmitis: BVH74_17345
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Entry
BVH74_17345 CDS
T07765
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppha
Halopseudomonas phragmitis
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppha03016
]
BVH74_17345
Enzymes [BR:
ppha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BVH74_17345
Transfer RNA biogenesis [BR:
ppha03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BVH74_17345
Prokaryotic type
BVH74_17345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AQZ96408
UniProt:
A0A1V0B8Y7
LinkDB
All DBs
Position
complement(3760092..3761150)
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AA seq
352 aa
AA seq
DB search
MTEEQLLGPRAWGAPCGSAWLKATPDDFQVTEVLDIPLSGEGEHLWLLLEKRGLNTEEVA
RRLARAAGVAVRDVSYAGLKDRQALTRQWFSVQLPGKADPDLSALWSDELRCSAQGRHRR
KLQRGAHSANRFLIRLHELQADRAALEQRLQQLAVAGVPNYVGPQRFGHQGGNIEQARSW
AQRAALPPARGTRSRLLSSARSLLFNRVLAERVGAGSWDQVLPGDLLAFTDSRSHFPATE
LVADDPRLAALDLHPTGPLWGQGEPAVGADTLTLELTQAAAEAELVAWLAAAGLKQERRV
LRLPISGLTWHYPSADCLELEFTLPTGCFATAVLRELVELTSNSQGSLQSDI
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagagcaactacttggcccccgggcctggggcgccccttgcggcagcgcgtgg
ctcaaggctacgccggacgactttcaggtaaccgaagtgctcgatattccgctcagcggc
gagggcgagcatctgtggttgctgctggaaaagcgcggtctcaataccgaagaagtggcc
cgccgactggcgcgggcggcgggtgtggctgtgcgtgatgtcagctatgccgggctcaag
gatcgccaggccctgactcggcaatggttcagcgtgcaactaccgggcaaggctgacccg
gatctgtctgcgctgtggtcggatgagctgcgttgcagcgctcagggtcggcatcgacgc
aagctgcagcgtggcgctcacagcgccaaccggttcctcattcgcctgcatgaactgcag
gccgatcgcgcagcgctggagcagcgtttgcagcaactggcggtcgccggtgtgcccaac
tatgtcgggccccagcgttttggccatcagggcggcaatatcgaacaggcgcgcagttgg
gctcagcgcgcggccttaccaccggccaggggtacgcgctcgcggctgctgtcgagcgcc
cgtagtctgctgttcaatcgggtgttggctgagcgggttggggccggaagctgggatcag
gtattgcccggcgatctgttggcctttaccgatagtcgtagccatttcccggccactgag
ctggtagcggatgacccgcgcctggccgcgctggatctgcatcccaccggtcccttgtgg
gggcagggcgagccggcggtcggtgccgataccctgaccctggaattgacgcaggcggca
gccgaggccgagttggtcgcctggctggcggccgctggcctgaagcaggagcgacgtgtt
ttgcgcctccccatcagcggcctgacgtggcattatccgtcagcggattgtcttgaactt
gaattcaccctgccgaccggctgtttcgctacagcggtattgcgtgagctggttgagttg
accagcaactcgcagggcagcctgcaaagtgatatctga
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