Phocoena phocoena (harbor porpoise): 136117883
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Entry
136117883 CDS
T11058
Symbol
RTN1
Name
(RefSeq) reticulon-1 isoform X1
KO
K20721
reticulon-1
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136117883 (RTN1)
03036 Chromosome and associated proteins [BR:
pphc03036
]
136117883 (RTN1)
Membrane trafficking [BR:
pphc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
136117883 (RTN1)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136117883 (RTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
DUF4736
Motif
Other DBs
NCBI-GeneID:
136117883
NCBI-ProteinID:
XP_065726919
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Position
2:41061577..41301815
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AA seq
776 aa
AA seq
DB search
MAAPPDPKEELLPLASPGSQWFGDRSEGEEEAVTPKGAKPEPQVGEPGPGLGSGAREAAP
RELGSGPARLPPVAMETASTGKADVSRAMDRTFSTAAKDGEGVCYTSLISDICYPPREDS
TYFTGILQKENSHITASESPEELRTPGPSLPDVPGTEPRGLFSSDSGIEMTPAESTEVNK
ILADPLDQMKAEAYKYIDITRPEEVKYQEQRHPKLEEKDLDFKNEDTDISAKSGEAREAE
KPSPVEGKILKDHLFEESTFEPYVDDISEAQHGAPLITAPVRITLTEIEPSVETATPEKT
PEKQDICLKPSPDTVPTVTVSEPEDDSPGSVTPPSSGTEPSAAESQGKCSISEDELITAI
KEAKGLSFETTESPRPAGQVADRPEAKARSGLPTIPSPLDHEASSAESGDSEIELVSEDP
LAAEDALPSGYVTFGHVGGPPPSPASPSIQYSILREEREAELDSELIIESCDASSASEES
PKREQDSPPMKPGALDAIREEPGTRAEERAHSRQGLAEPEPFLKFPSAAPQVCSELPSGD
GAPAPEGPAVPRTPVEAASYDQSSQATKGPGPQGPGVVPPLLFLNKQQAIDLLYWRDIKQ
TGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAY
LELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFN
GLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKIPGAKRHTE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccgcccgatcccaaagaagagctgctgccgctggccagtcccgggtcccag
tggttcggggaccggagcgagggggaggaagaagcggtgacgccgaaaggggccaagccc
gagccgcaggtgggggagcccggccctgggctgggctccggggcccgagaagctgcgccg
cgggaactgggctcgggccccgcccggctgccgcccgttgccatggaaactgcatccaca
ggtaaggcggatgtttccagggccatggatcgtaccttttcaacagcagcaaaagatggg
gaaggagtgtgttacacatctctgatttctgacatctgttacccacctcgggaggattct
acatatttcactggaattcttcagaaggaaaacagccacatcaccgcttcagagagccct
gaggagttgcgtacccccggtccctccttaccggatgtgcctgggacggagcctcgtggc
ttatttagttctgattctggaatagaaatgactcctgcagagtccactgaagtgaacaag
atcttagcagaccccctggaccagatgaaagcagaagcctataaatacattgacataact
aggccagaggaggtgaaatatcaggagcaacgtcaccccaagttggaagagaaagacttg
gactttaagaatgaggacactgacatctcagcaaaatccggagaggcccgtgaagcagag
aaaccatctcctgtggagggaaaaatcctcaaggaccatttatttgaagaatcaacgttt
gaaccatatgtagacgacatctctgaagcacagcacggtgctcctctgatcactgctcct
gtcagaatcacgctgactgagatcgagccttctgttgaaactgctaccccagagaagacc
cccgagaagcaagatatctgcctgaaaccaagtcctgacacagtccccacagtcaccgtc
tcagagcctgaagacgacagcccaggatccgtcactcctccgtcttctggaacagaacca
tctgctgcagaatcccaggggaaatgcagcatctccgaggatgagctgatcactgccatt
aaggaagcaaaggggttgtccttcgaaacaacggagagtccacggccagcgggccaggtg
gccgacaggccggaggccaaggccaggtccgggctgcccaccatccctagccccctggac
cacgaggccagcagcgcggagtcaggggactcggagatcgagttggtgtccgaggacccg
ctggccgccgaggacgctctgccctcgggctacgtgacctttggtcatgtgggtggcccg
ccgccgtcgccggcctctccgtccatccagtacagcatcctgagggaggagcgtgaggct
gagctggacagcgagctcatcatcgagtcgtgtgacgcctcctccgcctcggaggagagt
cccaaacgggagcaggactcgccgcccatgaagccgggtgccctggatgccatccgggag
gagccgggcacccgggccgaggagcgcgcccacagccggcagggcctggcggagccggag
cccttcctcaaattcccttcggccgccccccaagtctgctccgagctgccctctggagac
ggagcccctgcgcccgaggggcccgcagtgccacggacacctgtggaagcagcgagttac
gaccagagctcccaggccacaaagggccctgggcctcagggtccaggcgtcgtgccccct
ctgctgtttctcaataagcaacaagctattgacctgctgtactggagggacatcaagcag
acggggatagtgtttgggagcttcctgctgctactcttctccctgacccagttcagcgtt
gtgagtgtcgtggcctacctggcccttgctgcgctctcagccaccatcagtttccgcatc
tacaagtctgttttacaagctgtgcagaaaaccgacgagggtcaccctttcaaggcctac
ttggagcttgagatcacgctgtctcaggagcagattcagaagtacacagactgcctgcaa
ttctatgtgaacaacacgcttaaagaactgaggaggctcttccttgtccaggacctggtg
gattccttaaaatttgcagtcctgatgtggctcctgacttacgttggcgctctcttcaat
ggcttgaccctgctgctcatggctgtggtttcaatgtttactctacctgtagtgtatgtt
aagcaccaggcacagattgaccaatatctgggacttgtgaggactcacataaatgctgtt
gtggcaaagattcaggctaaaatcccaggcgctaaaaggcacactgagtaa
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